gene detail

Gene description

TAIR ID: AT2G33860

Short description: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related

Pathogen responsiveness: -0.16

General responsiveness: -1.50

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G030710

Wheat:

TAAFFX.51859.1.S1_AT

GO biological process

regulation of transcription, DNA-templated, abaxial cell fate specification, transcription, auxin-activated signaling pathway, response to auxin, auxin metabolic process, vegetative phase change, floral meristem determinacy

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF06507, Auxin response factor
Pfam	PF02362, B3 DNA binding domain
SMART	SM01019, B3

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT1G65620, AT2G37630, AT5G61850

Target:
AT5G20930, AT2G45190, AT4G36930

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

14 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.56	2.29E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.55	3.97E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.56	3.69E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.71	1.16E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.70	1.61E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.96	2.81E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.77	1.45E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.69	1.58E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.26	1.25E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.35	8.97E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.65	1.14E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.88	1.29E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.91	7.32E-15
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.55	5.62E-03