gene detail

Gene description

TAIR ID: AT2G32600

Short description: hydroxyproline-rich glycoprotein family protein

Pathogen responsiveness: -2.76

General responsiveness: -2.16

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

nucleus, spliceosomal complex

GO molecular function

zinc ion binding

Protein domain

Pfam	PF12874, Zinc-finger of C2H2 type
Pfam	PF16835, Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
SMART	SM01050, CactinC_cactus
SMART	SM00451, ZnF_U1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT4G18770

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.54	3.41E-09