gene detail

Gene description

TAIR ID: AT2G28930

Short description: protein kinase 1B

Pathogen responsiveness: -0.37

General responsiveness: -0.60

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G068117 GRMZM2G144042 GRMZM2G047588

Wheat: No orthologous gene

GO biological process

protein phosphorylation, defense response, cell surface receptor signaling pathway, positive regulation of stomatal opening

GO cellular component

chloroplast, plasma membrane

GO molecular function

protein serine/threonine kinase activity, ATP binding, transmembrane receptor protein serine/threonine kinase activity, protein tyrosine kinase activity, kinase activity

Protein domain

Pfam	PF07714, Protein tyrosine kinase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	3.06	4.49E-02
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.72	4.35E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.93	3.41E-10
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.64	1.64E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.37	2.89E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.52	1.79E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.52	2.09E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.92	2.62E-13
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.38	2.14E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.66	4.17E-10
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.76	3.66E-04
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	1.61	2.07E-07
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.65	2.68E-08
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.61	1.95E-08
GSE6176	Col, WT, control 4 h	Col, WT, PstDC3000 HrpA- 4 h	1.62	2.54E-02
GSE6176	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.58	2.53E-02