Gene: AT2G27080
     

Gene description


TAIR ID: AT2G27080

Short description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Pathogen responsiveness: 0.31

General responsiveness: 1.21

GO biological process


defense response to bacterium


GO cellular component


plasma membrane, integral component of membrane, plasmodesma


GO molecular function


molecular_function


Protein domain


PfamPF03168, Late embryogenesis abundant protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G14230, AT5G11260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


25 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.207.37E-03
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min4.491.22E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.624.50E-03
GSE17464Laer, controlLaer, PstDC3000 12 h-1.586.10E-03
GSE17464Laer, controlLaer, Flg22 1 h2.566.37E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.171.02E-04
GSE17464Penta, controlPenta, PstDC3000 12 h-1.585.05E-03
GSE17464Penta, controlPenta, Flg22 2 h2.255.80E-05
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.562.04E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.339.93E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.172.63E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-2.072.33E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-2.055.86E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.681.06E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.811.39E-10
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.998.14E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.455.41E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.007.54E-14
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.771.42E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h1.754.10E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.545.20E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h3.004.63E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.422.75E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.491.67E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.284.00E-02






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