gene detail

Gene description

TAIR ID: AT2G25930

Short description: hydroxyproline-rich glycoprotein family protein

Pathogen responsiveness: -0.21

General responsiveness: 0.19

Orthologous

Rice:

OS06G0142600

Maize:

GRMZM2G045275

Wheat: No orthologous gene

GO biological process

response to auxin, red, far-red light phototransduction, transcription, DNA-templated, photoperiodism, flowering, regulation of stomatal movement, regulation of transcription, circumnutation, response to abscisic acid, unidimensional cell growth, response to cold, regulation of flower development, circadian rhythm

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04712: Circadian rhythm - plant

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 41 (Top5%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, PstDC3000 12 h	2.05	2.86E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	4.51	3.67E-15
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	4.47	1.99E-15
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	4.80	1.04E-15
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	5.03	1.54E-16
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.70	7.41E-03