Gene: AT2G24540
     

Gene description


TAIR ID: AT2G24540

Short description: Galactose oxidase/kelch repeat superfamily protein

Pathogen responsiveness: -0.44

General responsiveness: 0.85

GO biological process


red or far-red light signaling pathway, red, far-red light phototransduction, protein ubiquitination


GO cellular component


cytoplasm


GO molecular function


protein binding


Protein domain


PfamPF00646, F-box domain
PfamPF01344, Kelch motif
SMARTSM00612, Kelch
SMARTSM00256, FBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660, AT3G14230

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.554.85E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.283.82E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-2.302.14E-12
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.703.54E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.264.45E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.882.33E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.882.53E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.088.96E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.741.19E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.571.77E-06
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.799.36E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.924.68E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.971.56E-16
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.981.06E-02






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