gene detail

Gene description

TAIR ID: AT2G24260

Short description: LJRHL1-like 1

Pathogen responsiveness: -1.98

General responsiveness: 1.02

Orthologous

Rice:

OS06G0184000 OS03G0797600 OS01G0111500 OS03G0205300

Maize:

GRMZM2G350165

Wheat: No orthologous gene

GO biological process

root hair cell development, regulation of transcription, DNA-templated, root hair elongation, root hair cell differentiation, pollen sperm cell differentiation, transcription from RNA polymerase II promoter, microgametogenesis

GO cellular component

nucleus

GO molecular function

protein dimerization activity, transcription factor activity, sequence-specific DNA binding, core promoter sequence-specific DNA binding, protein binding, transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G27920, AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.87	7.28E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.57	3.55E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.71	4.17E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.36	1.22E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.50	2.99E-04