Gene: AT2G22760
     

Gene description


TAIR ID: AT2G22760

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 0.13

General responsiveness: -1.21

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding, DNA binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.861.34E-06
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.643.65E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h3.082.91E-06
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h2.641.56E-04
GSE21920Col, WT, mockCol, WT, Pto 6 h1.938.25E-03
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h1.912.46E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.284.06E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d1.571.07E-02
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.111.36E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.691.27E-11
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.255.03E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.441.13E-09
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.393.78E-09
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.329.24E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.553.11E-10
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h1.544.66E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.772.47E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.887.46E-06
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.679.48E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.873.24E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.016.47E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.136.97E-03
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h2.052.16E-02






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