gene detail

Gene description

TAIR ID: AT2G22430

Short description: homeobox protein 6

Pathogen responsiveness: -1.36

General responsiveness: -0.79

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

abscisic acid-activated signaling pathway, transcription, DNA-templated, regulation of transcription, positive regulation of transcription, negative regulation of abscisic acid-activated signaling pathway, response to water deprivation

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF02183, Homeobox associated leucine zipper
Pfam	PF00046, Homeobox domain
SMART	SM00389, HOX

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
AT2G40890

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.66	1.63E-05
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.63	2.55E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.86	1.49E-06
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.51	7.10E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.51	1.87E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.72	2.45E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.50	6.53E-04