Gene: AT2G19570
Gene description
TAIR ID: AT2G19570
Short description: cytidine deaminase 1
Pathogen responsiveness: 0.65
General responsiveness: 0.82
GO biological process
cytidine deamination, cytidine catabolic process
GO cellular component
cytosol, nucleus
GO molecular function
deoxycytidine deaminase activity, cytidine deaminase activity, protein homodimerization activity, zinc ion binding
Protein domain
| Pfam | PF08211, Cytidine and deoxycytidylate deaminase zinc-binding region |
| Pfam | PF00383, Cytidine and deoxycytidylate deaminase zinc-binding region |
Metabolic pathway
PWY-6556: pyrimidine ribonucleosides salvage II
PWY-7199: pyrimidine deoxyribonucleosides salvage
PWY-7196: superpathway of pyrimidine ribonucleosides salvage
PWY-7193: pyrimidine ribonucleosides salvage I
PWY0-163: salvage pathways of pyrimidine ribonucleotides
PWY-7200: superpathway of pyrimidine deoxyribonucleoside salvage
click to view PPI networkCoexpression network
Differentially expressed condition 
22 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 4.14 | 1.36E-06 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 4.15 | 4.18E-07 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 4.22 | 8.69E-07 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 4.67 | 6.19E-10 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.51 | 4.40E-03 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 1.97 | 1.01E-04 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 1.71 | 4.26E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 3.83 | 1.07E-15 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 3.54 | 3.93E-15 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 4.41 | 2.20E-16 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 2.89 | 4.36E-14 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 4.20 | 3.10E-16 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.10 | 6.77E-12 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.73 | 1.45E-10 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 3.63 | 1.47E-15 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 2.21 | 4.45E-12 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 3.01 | 3.27E-05 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 2.38 | 1.18E-03 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 2.32 | 3.69E-02 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 1.65 | 5.99E-03 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 2.05 | 6.82E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 1.55 | 3.00E-03 |
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