gene detail

Gene description

TAIR ID: AT2G18290

Short description: anaphase promoting complex 10

Pathogen responsiveness: -0.43

General responsiveness: -0.42

Orthologous

Rice:

OS05G0579800

Maize:

GRMZM2G054247

Wheat:

TA.9190.2.S1_AT TA.9190.2.S1_X_AT

GO biological process

positive regulation of ubiquitin protein ligase activity, cell division, regulation of DNA endoreduplication, cell cycle, protein K11-linked ubiquitination, phloem or xylem histogenesis, negative regulation of DNA endoreduplication, anaphase-promoting complex-dependent catabolic process, cell proliferation

GO cellular component

anaphase-promoting complex, nuclear body, nucleus

GO molecular function

protein binding, ubiquitin protein ligase activity

Protein domain

Pfam	PF03256, Anaphase-promoting complex, subunit 10 (APC10)
SMART	SM01337, APC10

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04120: Ubiquitin mediated proteolysis

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 23 (Top10%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.51	1.04E-04
GSE17464	Penta, control	Penta, Flg22 2 h	-1.76	8.48E-06
GSE17464	Penta, control	Penta, Flg22 2 h	-1.83	7.21E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.76	2.76E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.74	4.50E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.68	1.13E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.71	6.51E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.50	4.94E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.95	8.37E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.59	1.64E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.06	1.27E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.83	6.94E-05
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.59	3.65E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.63	3.58E-19
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.62	5.30E-03