gene detail

Gene description

TAIR ID: AT2G13650

Short description: golgi nucleotide sugar transporter 1

Pathogen responsiveness: -0.49

General responsiveness: -1.75

Orthologous

Rice:

OS03G0826300 OS08G0107400

Maize:

GRMZM5G863229

Wheat: No orthologous gene

GO biological process

GDP-fucose transport, GDP-mannose transport, carbohydrate transport

GO cellular component

plasma membrane, Golgi membrane, integral component of membrane, Golgi apparatus

GO molecular function

nucleotide-sugar transmembrane transporter activity, antiporter activity, GDP-mannose transmembrane transporter activity, GDP-fucose transmembrane transporter activity

Protein domain

Pfam	PF03151, Triose-phosphate Transporter family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 31 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.60	1.84E-02
GSE17464	Laer, control	Laer, Flg22 1 h	1.55	9.39E-06
GSE17464	Laer, control	Laer, Flg22 2 h	1.56	1.40E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.93	1.90E-09
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.51	2.36E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.60	7.61E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.76	2.44E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.94	6.76E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.61	1.66E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.59	2.11E-13
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.59	6.09E-13
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.62	1.41E-13
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.54	5.39E-12