Gene: AT1G80170
     

Gene description


TAIR ID: AT1G80170

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -1.25

General responsiveness: -2.27

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G079263  

Wheat: No orthologous gene

GO biological process


carbohydrate metabolic process, cell wall organization


GO cellular component


plant-type cell wall, extracellular region


GO molecular function


polygalacturonase activity, lyase activity, protein binding


Protein domain


PfamPF00295, Glycosyl hydrolases family 28
SMARTSM00710, PbH1

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-2.412.07E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-3.407.03E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.491.71E-04
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.011.03E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.521.11E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.663.51E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.913.89E-13






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