gene detail

Gene description

TAIR ID: AT1G80110

Short description: phloem protein 2-B11

Pathogen responsiveness: 0.76

General responsiveness: -0.20

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein ubiquitination

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF14299, Phloem protein 2
Pfam	PF00646, F-box domain
SMART	SM00256, FBOX

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

27 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.80	3.57E-08
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.80	1.58E-05
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a C216aA 6 h	2.42	1.57E-05
GSE21920	Col, WT, mock	Col, WT, Pto 6 h	2.17	2.08E-04
GSE21920	Col, ulp1, mock	Col, ulp1, Pto 6 h	2.34	1.43E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.93	2.71E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.08	1.23E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.09	9.39E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.96	5.16E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.65	1.28E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.81	8.84E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.61	8.80E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	4.36	3.03E-12
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	5.53	5.48E-30
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	2.21	3.47E-08
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	4.72	1.80E-24
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	3.31	9.44E-16
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	3.64	2.53E-18
GSE56094	Col, WT, control 5 h	Col, WT, PstDC3000 5 h	1.80	1.35E-05
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	2.60	2.55E-10
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	3.92	2.29E-18
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.90	2.69E-06
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	4.85	3.03E-25
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	2.23	2.68E-08
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	4.27	1.71E-21
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	1.97	7.21E-07
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	3.38	2.07E-08