gene detail

Gene description

TAIR ID: AT1G79790

Short description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Pathogen responsiveness: -0.87

General responsiveness: 0.05

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G117609

Wheat:

TA.8481.1.S1_AT

GO biological process

riboflavin biosynthetic process

GO cellular component

chloroplast stroma, chloroplast

GO molecular function

hydrolase activity, FMN hydrolase activity, protein self-association

Protein domain

Pfam	PF13419, Haloacid dehalogenase-like hydrolase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00740: Riboflavin metabolism

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.71	9.16E-07
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.78	5.91E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.24	2.52E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.53	6.61E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.98	1.22E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.23	6.29E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-2.07	4.23E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-2.03	4.93E-02