Gene: AT1G78570
     


Gene description


TAIR ID: AT1G78570

Short description: rhamnose biosynthesis 1

Pathogen responsiveness: -0.84

General responsiveness: -0.20

Orthologous


Rice:

OS03G0278200  

Maize:

GRMZM2G166767  

Wheat: No orthologous gene

GO biological process


UDP-rhamnose biosynthetic process, flavonol biosynthetic process, oxidation-reduction process, cell wall organization, auxin efflux, nucleotide-sugar metabolic process, cell differentiation, regulation of cell proliferation


GO cellular component


cytosol, chloroplast, plasmodesma


GO molecular function


isomerase activity, UDP-L-rhamnose synthase activity, catalytic activity, UDP-glucose 4,6-dehydratase activity, oxidoreductase activity, dTDP-glucose 4,6-dehydratase activity


Protein domain


PfamPF16363, GDP-mannose 4,6 dehydratase
PfamPF04321, RmlD substrate binding domain

Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h1.661.17E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.595.67E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.209.62E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.714.84E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.792.08E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.111.68E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.594.00E-11
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.502.13E-04
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h-2.318.80E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.781.34E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.552.99E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.