co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080149: sucrose induced translational repression	0.00E+00
2	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
3	GO:0046680: response to DDT	0.00E+00
4	GO:0002084: protein depalmitoylation	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0030163: protein catabolic process	4.93E-06
7	GO:0006511: ubiquitin-dependent protein catabolic process	7.14E-06
8	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.52E-04
9	GO:0000032: cell wall mannoprotein biosynthetic process	1.52E-04
10	GO:1900384: regulation of flavonol biosynthetic process	1.52E-04
11	GO:0043609: regulation of carbon utilization	1.52E-04
12	GO:0035266: meristem growth	1.52E-04
13	GO:0007292: female gamete generation	1.52E-04
14	GO:0042350: GDP-L-fucose biosynthetic process	1.52E-04
15	GO:0002215: defense response to nematode	3.47E-04
16	GO:0051788: response to misfolded protein	3.47E-04
17	GO:0009156: ribonucleoside monophosphate biosynthetic process	3.47E-04
18	GO:0006597: spermine biosynthetic process	3.47E-04
19	GO:0015709: thiosulfate transport	3.47E-04
20	GO:0031538: negative regulation of anthocyanin metabolic process	3.47E-04
21	GO:0071422: succinate transmembrane transport	3.47E-04
22	GO:0009805: coumarin biosynthetic process	3.47E-04
23	GO:0042853: L-alanine catabolic process	3.47E-04
24	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.68E-04
25	GO:0006517: protein deglycosylation	5.68E-04
26	GO:0033591: response to L-ascorbic acid	5.68E-04
27	GO:0060968: regulation of gene silencing	5.68E-04
28	GO:0071329: cellular response to sucrose stimulus	8.13E-04
29	GO:0009226: nucleotide-sugar biosynthetic process	8.13E-04
30	GO:0048577: negative regulation of short-day photoperiodism, flowering	8.13E-04
31	GO:0043967: histone H4 acetylation	8.13E-04
32	GO:0009298: GDP-mannose biosynthetic process	8.13E-04
33	GO:0015729: oxaloacetate transport	8.13E-04
34	GO:0009165: nucleotide biosynthetic process	1.08E-03
35	GO:1902584: positive regulation of response to water deprivation	1.08E-03
36	GO:0010363: regulation of plant-type hypersensitive response	1.08E-03
37	GO:0045927: positive regulation of growth	1.36E-03
38	GO:0071423: malate transmembrane transport	1.36E-03
39	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.36E-03
40	GO:0042176: regulation of protein catabolic process	1.67E-03
41	GO:0035435: phosphate ion transmembrane transport	1.67E-03
42	GO:0006596: polyamine biosynthetic process	1.67E-03
43	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.67E-03
44	GO:0048827: phyllome development	1.67E-03
45	GO:0048232: male gamete generation	1.67E-03
46	GO:0006555: methionine metabolic process	1.67E-03
47	GO:0043248: proteasome assembly	1.67E-03
48	GO:0034389: lipid particle organization	2.01E-03
49	GO:0043966: histone H3 acetylation	2.01E-03
50	GO:0017148: negative regulation of translation	2.01E-03
51	GO:0080113: regulation of seed growth	2.01E-03
52	GO:0019509: L-methionine salvage from methylthioadenosine	2.01E-03
53	GO:0008272: sulfate transport	2.36E-03
54	GO:0006401: RNA catabolic process	2.36E-03
55	GO:0006368: transcription elongation from RNA polymerase II promoter	2.36E-03
56	GO:0006744: ubiquinone biosynthetic process	2.36E-03
57	GO:0080186: developmental vegetative growth	2.36E-03
58	GO:0035265: organ growth	2.73E-03
59	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.73E-03
60	GO:0006491: N-glycan processing	2.73E-03
61	GO:0010078: maintenance of root meristem identity	2.73E-03
62	GO:0007155: cell adhesion	2.73E-03
63	GO:0010928: regulation of auxin mediated signaling pathway	2.73E-03
64	GO:0006499: N-terminal protein myristoylation	2.75E-03
65	GO:0007275: multicellular organism development	2.83E-03
66	GO:0006972: hyperosmotic response	3.12E-03
67	GO:0009699: phenylpropanoid biosynthetic process	3.12E-03
68	GO:0006002: fructose 6-phosphate metabolic process	3.12E-03
69	GO:0015996: chlorophyll catabolic process	3.12E-03
70	GO:0045087: innate immune response	3.15E-03
71	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.53E-03
72	GO:2000024: regulation of leaf development	3.53E-03
73	GO:0009835: fruit ripening	3.53E-03
74	GO:0046685: response to arsenic-containing substance	3.53E-03
75	GO:0009744: response to sucrose	4.05E-03
76	GO:0000103: sulfate assimilation	4.40E-03
77	GO:0048829: root cap development	4.40E-03
78	GO:0072593: reactive oxygen species metabolic process	4.86E-03
79	GO:0046856: phosphatidylinositol dephosphorylation	4.86E-03
80	GO:0010015: root morphogenesis	4.86E-03
81	GO:0016192: vesicle-mediated transport	5.24E-03
82	GO:0055046: microgametogenesis	5.83E-03
83	GO:0009933: meristem structural organization	6.33E-03
84	GO:0034605: cellular response to heat	6.33E-03
85	GO:0046686: response to cadmium ion	6.38E-03
86	GO:0009825: multidimensional cell growth	6.86E-03
87	GO:0019853: L-ascorbic acid biosynthetic process	6.86E-03
88	GO:0090351: seedling development	6.86E-03
89	GO:0010053: root epidermal cell differentiation	6.86E-03
90	GO:0009116: nucleoside metabolic process	7.95E-03
91	GO:0009651: response to salt stress	8.07E-03
92	GO:0008299: isoprenoid biosynthetic process	8.51E-03
93	GO:0019915: lipid storage	9.10E-03
94	GO:0009814: defense response, incompatible interaction	9.69E-03
95	GO:0030433: ubiquitin-dependent ERAD pathway	9.69E-03
96	GO:0019748: secondary metabolic process	9.69E-03
97	GO:0008284: positive regulation of cell proliferation	1.16E-02
98	GO:0006662: glycerol ether metabolic process	1.29E-02
99	GO:0009646: response to absence of light	1.36E-02
100	GO:0016032: viral process	1.57E-02
101	GO:0009738: abscisic acid-activated signaling pathway	1.60E-02
102	GO:0019760: glucosinolate metabolic process	1.71E-02
103	GO:0001666: response to hypoxia	1.94E-02
104	GO:0009817: defense response to fungus, incompatible interaction	2.34E-02
105	GO:0010311: lateral root formation	2.43E-02
106	GO:0006811: ion transport	2.51E-02
107	GO:0009407: toxin catabolic process	2.51E-02
108	GO:0010043: response to zinc ion	2.60E-02
109	GO:0007568: aging	2.60E-02
110	GO:0009910: negative regulation of flower development	2.60E-02
111	GO:0034599: cellular response to oxidative stress	2.86E-02
112	GO:0006839: mitochondrial transport	3.05E-02
113	GO:0006631: fatty acid metabolic process	3.14E-02
114	GO:0006886: intracellular protein transport	3.20E-02
115	GO:0008283: cell proliferation	3.32E-02
116	GO:0010114: response to red light	3.32E-02
117	GO:0051707: response to other organism	3.32E-02
118	GO:0009636: response to toxic substance	3.61E-02
119	GO:0009965: leaf morphogenesis	3.61E-02
120	GO:0009751: response to salicylic acid	3.76E-02
121	GO:0009408: response to heat	3.81E-02
122	GO:0000165: MAPK cascade	3.81E-02
123	GO:0006486: protein glycosylation	4.11E-02
124	GO:0051603: proteolysis involved in cellular protein catabolic process	4.21E-02
125	GO:0010224: response to UV-B	4.21E-02
126	GO:0006096: glycolytic process	4.63E-02
127	GO:0048367: shoot system development	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0061133: endopeptidase activator activity	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0070628: proteasome binding	1.84E-05
5	GO:0102293: pheophytinase b activity	1.52E-04
6	GO:0043813: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	1.52E-04
7	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.52E-04
8	GO:0004476: mannose-6-phosphate isomerase activity	1.52E-04
9	GO:0016768: spermine synthase activity	1.52E-04
10	GO:0050577: GDP-L-fucose synthase activity	1.52E-04
11	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	3.47E-04
12	GO:0008805: carbon-monoxide oxygenase activity	3.47E-04
13	GO:0015117: thiosulfate transmembrane transporter activity	3.47E-04
14	GO:1901677: phosphate transmembrane transporter activity	3.47E-04
15	GO:0047746: chlorophyllase activity	3.47E-04
16	GO:0010297: heteropolysaccharide binding	3.47E-04
17	GO:0004766: spermidine synthase activity	3.47E-04
18	GO:0050347: trans-octaprenyltranstransferase activity	3.47E-04
19	GO:0015141: succinate transmembrane transporter activity	5.68E-04
20	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.68E-04
21	GO:0005310: dicarboxylic acid transmembrane transporter activity	5.68E-04
22	GO:0016887: ATPase activity	6.76E-04
23	GO:0004298: threonine-type endopeptidase activity	6.79E-04
24	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	8.13E-04
25	GO:0015131: oxaloacetate transmembrane transporter activity	8.13E-04
26	GO:0017077: oxidative phosphorylation uncoupler activity	8.13E-04
27	GO:0004749: ribose phosphate diphosphokinase activity	8.13E-04
28	GO:0000993: RNA polymerase II core binding	1.08E-03
29	GO:0004659: prenyltransferase activity	1.08E-03
30	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.67E-03
31	GO:0036402: proteasome-activating ATPase activity	1.67E-03
32	GO:0008474: palmitoyl-(protein) hydrolase activity	1.67E-03
33	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.01E-03
34	GO:0004656: procollagen-proline 4-dioxygenase activity	2.01E-03
35	GO:0003872: 6-phosphofructokinase activity	2.36E-03
36	GO:0015140: malate transmembrane transporter activity	2.36E-03
37	GO:0008320: protein transmembrane transporter activity	2.36E-03
38	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.15E-03
39	GO:0003746: translation elongation factor activity	3.15E-03
40	GO:0045309: protein phosphorylated amino acid binding	3.96E-03
41	GO:0030234: enzyme regulator activity	4.40E-03
42	GO:0019904: protein domain specific binding	4.86E-03
43	GO:0004161: dimethylallyltranstransferase activity	4.86E-03
44	GO:0015116: sulfate transmembrane transporter activity	5.34E-03
45	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.34E-03
46	GO:0031072: heat shock protein binding	5.83E-03
47	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.33E-03
48	GO:0004175: endopeptidase activity	6.33E-03
49	GO:0017025: TBP-class protein binding	6.86E-03
50	GO:0004867: serine-type endopeptidase inhibitor activity	6.86E-03
51	GO:0051536: iron-sulfur cluster binding	7.95E-03
52	GO:0031418: L-ascorbic acid binding	7.95E-03
53	GO:0043130: ubiquitin binding	7.95E-03
54	GO:0008408: 3'-5' exonuclease activity	9.10E-03
55	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.99E-03
56	GO:0044212: transcription regulatory region DNA binding	1.12E-02
57	GO:0047134: protein-disulfide reductase activity	1.16E-02
58	GO:0004402: histone acetyltransferase activity	1.22E-02
59	GO:0004527: exonuclease activity	1.29E-02
60	GO:0050662: coenzyme binding	1.36E-02
61	GO:0004791: thioredoxin-disulfide reductase activity	1.36E-02
62	GO:0016853: isomerase activity	1.36E-02
63	GO:0004518: nuclease activity	1.57E-02
64	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.64E-02
65	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.79E-02
66	GO:0008237: metallopeptidase activity	1.79E-02
67	GO:0051213: dioxygenase activity	1.94E-02
68	GO:0008375: acetylglucosaminyltransferase activity	2.10E-02
69	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.18E-02
70	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.34E-02
71	GO:0030246: carbohydrate binding	2.43E-02
72	GO:0004222: metalloendopeptidase activity	2.51E-02
73	GO:0004364: glutathione transferase activity	3.23E-02
74	GO:0005198: structural molecule activity	3.61E-02
75	GO:0031625: ubiquitin protein ligase binding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	9.40E-11
2	GO:0008541: proteasome regulatory particle, lid subcomplex	8.16E-08
3	GO:0005839: proteasome core complex	3.40E-05
4	GO:0008023: transcription elongation factor complex	1.52E-04
5	GO:0008540: proteasome regulatory particle, base subcomplex	2.00E-04
6	GO:0030130: clathrin coat of trans-Golgi network vesicle	5.68E-04
7	GO:0030132: clathrin coat of coated pit	5.68E-04
8	GO:0005737: cytoplasm	6.08E-04
9	GO:0033588: Elongator holoenzyme complex	8.13E-04
10	GO:0005945: 6-phosphofructokinase complex	1.36E-03
11	GO:0005789: endoplasmic reticulum membrane	1.72E-03
12	GO:0031597: cytosolic proteasome complex	2.01E-03
13	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.36E-03
14	GO:0031595: nuclear proteasome complex	2.36E-03
15	GO:0000123: histone acetyltransferase complex	2.36E-03
16	GO:0031982: vesicle	2.73E-03
17	GO:0005811: lipid particle	3.12E-03
18	GO:0019773: proteasome core complex, alpha-subunit complex	3.12E-03
19	GO:0009536: plastid	4.20E-03
20	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.09E-02
21	GO:0005615: extracellular space	1.51E-02
22	GO:0016592: mediator complex	1.57E-02
23	GO:0005886: plasma membrane	1.68E-02
24	GO:0032580: Golgi cisterna membrane	1.71E-02
25	GO:0005794: Golgi apparatus	1.79E-02
26	GO:0005788: endoplasmic reticulum lumen	2.02E-02
27	GO:0031902: late endosome membrane	3.14E-02
28	GO:0005743: mitochondrial inner membrane	3.55E-02
29	GO:0005635: nuclear envelope	4.31E-02