gene detail

Gene description

TAIR ID: AT1G78390

Short description: nine-cis-epoxycarotenoid dioxygenase 9

Pathogen responsiveness: -0.89

General responsiveness: -1.54

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process, seed dormancy process, abscisic acid biosynthetic process

GO cellular component

chloroplast, chloroplast stroma

GO molecular function

9-cis-epoxycarotenoid dioxygenase activity, metal ion binding

Protein domain

Pfam	PF03055, Retinal pigment epithelial membrane protein

Metabolic pathway

PWY-695: abscisic acid biosynthesis

KEGG pathway

PATH:ath00906: Carotenoid biosynthesis

Transcriptional regulation

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.13	2.05E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-3.46	1.22E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-3.64	1.98E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-4.19	1.44E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	-2.80	1.55E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-5.22	9.08E-07