gene detail

Gene description

TAIR ID: AT1G78070

Short description: Transducin/WD40 repeat-like superfamily protein

Pathogen responsiveness: -0.34

General responsiveness: 0.21

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

Cul4-RING E3 ubiquitin ligase complex, cytoplasm

GO molecular function

molecular_function

Protein domain

Pfam	PF00400, WD domain, G-beta repeat
SMART	SM00320, WD40

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT4G36990, AT2G47190

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	-1.94	5.34E-06
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-1.81	5.11E-06
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	-1.66	7.26E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.16	1.33E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.56	3.93E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.63	2.04E-07
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.74	1.72E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.87	6.60E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.68	1.14E-03