gene detail

Gene description

TAIR ID: AT1G76730

Short description: NagB/RpiA/CoA transferase-like superfamily protein

Pathogen responsiveness: -1.11

General responsiveness: 1.66

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

intracellular mRNA localization

GO cellular component

chloroplast

GO molecular function

ATP binding, catalytic activity

Protein domain

Pfam	PF01812, 5-formyltetrahydrofolate cyclo-ligase family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00670: One carbon pool by folate

Transcriptional regulation

Regulator:
AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.12	3.19E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.71	3.31E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.94	4.56E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.71	1.24E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.89	5.63E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.78	7.60E-17
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.52	3.08E-13