gene detail

Gene description

TAIR ID: AT1G72310

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.98

General responsiveness: -2.26

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

proteasome-mediated ubiquitin-dependent protein catabolic process, protein ubiquitination

GO cellular component

integral component of membrane, nucleus

GO molecular function

ubiquitin protein ligase activity, metal ion binding

Protein domain

Pfam	PF13639, Ring finger domain
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.53	1.66E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.71	2.89E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.55	7.45E-14
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.69	4.44E-16
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.90	1.25E-18