gene detail

Gene description

TAIR ID: AT1G72210

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G006631

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus, integral component of membrane

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.97	3.40E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.77	2.56E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.30	1.37E-05