Gene: AT1G72200
     

Gene description


TAIR ID: AT1G72200

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.42

General responsiveness: 1.08

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT3G16857, AT4G16110, AT3G14230, AT5G22570, AT2G46130, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d-1.976.14E-07
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d-2.683.16E-08
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-2.511.45E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.009.69E-06
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.568.52E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.683.88E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.851.57E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.