Gene: AT1G71020
     

Gene description


TAIR ID: AT1G71020

Short description: ARM repeat superfamily protein

Pathogen responsiveness: -0.65

General responsiveness: -1.96

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G471733  

Wheat: No orthologous gene

GO biological process


protein ubiquitination, protein autoubiquitination, regulation of jasmonic acid mediated signaling pathway


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
PfamPF00514, Armadillo/beta-catenin-like repeat
SMARTSM00185, ARM
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.834.26E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.082.24E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.015.25E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.201.12E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.015.15E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.121.58E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.619.98E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.511.66E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.661.96E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.651.17E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.512.04E-02






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