co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G71020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:2000469: negative regulation of peroxidase activity	0.00E+00
4	GO:0030155: regulation of cell adhesion	0.00E+00
5	GO:0000025: maltose catabolic process	0.00E+00
6	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
7	GO:0090279: regulation of calcium ion import	0.00E+00
8	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
9	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
10	GO:0080127: fruit septum development	0.00E+00
11	GO:0015717: triose phosphate transport	0.00E+00
12	GO:1905177: tracheary element differentiation	0.00E+00
13	GO:0071474: cellular hyperosmotic response	0.00E+00
14	GO:0015979: photosynthesis	7.27E-07
15	GO:0032544: plastid translation	1.52E-05
16	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	4.01E-05
17	GO:0009773: photosynthetic electron transport in photosystem I	4.64E-05
18	GO:0005983: starch catabolic process	5.78E-05
19	GO:0010021: amylopectin biosynthetic process	7.15E-05
20	GO:0010027: thylakoid membrane organization	7.91E-05
21	GO:0009266: response to temperature stimulus	8.58E-05
22	GO:0061077: chaperone-mediated protein folding	1.86E-04
23	GO:0010017: red or far-red light signaling pathway	2.12E-04
24	GO:0000023: maltose metabolic process	3.37E-04
25	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	3.37E-04
26	GO:0005980: glycogen catabolic process	3.37E-04
27	GO:0043007: maintenance of rDNA	3.37E-04
28	GO:0030388: fructose 1,6-bisphosphate metabolic process	7.34E-04
29	GO:0051262: protein tetramerization	7.34E-04
30	GO:0005976: polysaccharide metabolic process	7.34E-04
31	GO:0018026: peptidyl-lysine monomethylation	7.34E-04
32	GO:0090342: regulation of cell aging	7.34E-04
33	GO:0009658: chloroplast organization	8.15E-04
34	GO:0042254: ribosome biogenesis	8.43E-04
35	GO:0015995: chlorophyll biosynthetic process	9.50E-04
36	GO:0006094: gluconeogenesis	1.08E-03
37	GO:0006412: translation	1.10E-03
38	GO:0048281: inflorescence morphogenesis	1.19E-03
39	GO:0006000: fructose metabolic process	1.19E-03
40	GO:0006518: peptide metabolic process	1.19E-03
41	GO:0010623: programmed cell death involved in cell development	1.19E-03
42	GO:0080055: low-affinity nitrate transport	1.19E-03
43	GO:0035436: triose phosphate transmembrane transport	1.19E-03
44	GO:0016050: vesicle organization	1.19E-03
45	GO:0009409: response to cold	1.51E-03
46	GO:0009735: response to cytokinin	1.52E-03
47	GO:0010306: rhamnogalacturonan II biosynthetic process	1.71E-03
48	GO:0010148: transpiration	1.71E-03
49	GO:0010731: protein glutathionylation	1.71E-03
50	GO:1901332: negative regulation of lateral root development	1.71E-03
51	GO:0010023: proanthocyanidin biosynthetic process	2.30E-03
52	GO:0051322: anaphase	2.30E-03
53	GO:0009765: photosynthesis, light harvesting	2.30E-03
54	GO:0006109: regulation of carbohydrate metabolic process	2.30E-03
55	GO:0010600: regulation of auxin biosynthetic process	2.30E-03
56	GO:0015846: polyamine transport	2.30E-03
57	GO:0006552: leucine catabolic process	2.30E-03
58	GO:0010508: positive regulation of autophagy	2.30E-03
59	GO:0051205: protein insertion into membrane	2.30E-03
60	GO:0015713: phosphoglycerate transport	2.30E-03
61	GO:0006808: regulation of nitrogen utilization	2.30E-03
62	GO:0045038: protein import into chloroplast thylakoid membrane	2.93E-03
63	GO:0035434: copper ion transmembrane transport	2.93E-03
64	GO:0006461: protein complex assembly	2.93E-03
65	GO:0009646: response to absence of light	3.59E-03
66	GO:0000470: maturation of LSU-rRNA	3.63E-03
67	GO:0010190: cytochrome b6f complex assembly	3.63E-03
68	GO:0003006: developmental process involved in reproduction	3.63E-03
69	GO:0009643: photosynthetic acclimation	3.63E-03
70	GO:0010304: PSII associated light-harvesting complex II catabolic process	3.63E-03
71	GO:0019252: starch biosynthetic process	3.85E-03
72	GO:0009955: adaxial/abaxial pattern specification	4.37E-03
73	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.37E-03
74	GO:0042026: protein refolding	4.37E-03
75	GO:0006458: 'de novo' protein folding	4.37E-03
76	GO:1901259: chloroplast rRNA processing	4.37E-03
77	GO:0070370: cellular heat acclimation	5.15E-03
78	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	5.15E-03
79	GO:0009645: response to low light intensity stimulus	5.15E-03
80	GO:0022904: respiratory electron transport chain	5.15E-03
81	GO:0030307: positive regulation of cell growth	5.15E-03
82	GO:0010103: stomatal complex morphogenesis	5.15E-03
83	GO:0010161: red light signaling pathway	5.15E-03
84	GO:0010928: regulation of auxin mediated signaling pathway	5.99E-03
85	GO:0005978: glycogen biosynthetic process	5.99E-03
86	GO:0030091: protein repair	5.99E-03
87	GO:0006353: DNA-templated transcription, termination	5.99E-03
88	GO:0009704: de-etiolation	5.99E-03
89	GO:0006002: fructose 6-phosphate metabolic process	6.87E-03
90	GO:0015996: chlorophyll catabolic process	6.87E-03
91	GO:0001558: regulation of cell growth	6.87E-03
92	GO:0009657: plastid organization	6.87E-03
93	GO:0010206: photosystem II repair	7.79E-03
94	GO:0048507: meristem development	7.79E-03
95	GO:0006783: heme biosynthetic process	7.79E-03
96	GO:0000160: phosphorelay signal transduction system	8.19E-03
97	GO:0010218: response to far red light	8.59E-03
98	GO:0042761: very long-chain fatty acid biosynthetic process	8.75E-03
99	GO:0005982: starch metabolic process	8.75E-03
100	GO:0009631: cold acclimation	9.01E-03
101	GO:0031627: telomeric loop formation	9.76E-03
102	GO:0006782: protoporphyrinogen IX biosynthetic process	9.76E-03
103	GO:0048829: root cap development	9.76E-03
104	GO:0034599: cellular response to oxidative stress	1.03E-02
105	GO:0010015: root morphogenesis	1.08E-02
106	GO:0009073: aromatic amino acid family biosynthetic process	1.08E-02
107	GO:0043085: positive regulation of catalytic activity	1.08E-02
108	GO:0006415: translational termination	1.08E-02
109	GO:0009750: response to fructose	1.08E-02
110	GO:0010582: floral meristem determinacy	1.19E-02
111	GO:0071365: cellular response to auxin stimulus	1.19E-02
112	GO:0010114: response to red light	1.28E-02
113	GO:0005986: sucrose biosynthetic process	1.30E-02
114	GO:0010102: lateral root morphogenesis	1.30E-02
115	GO:0010628: positive regulation of gene expression	1.30E-02
116	GO:0006006: glucose metabolic process	1.30E-02
117	GO:0018107: peptidyl-threonine phosphorylation	1.30E-02
118	GO:0009718: anthocyanin-containing compound biosynthetic process	1.30E-02
119	GO:0009644: response to high light intensity	1.38E-02
120	GO:0006302: double-strand break repair	1.42E-02
121	GO:0048467: gynoecium development	1.42E-02
122	GO:0006810: transport	1.53E-02
123	GO:0010025: wax biosynthetic process	1.66E-02
124	GO:0009944: polarity specification of adaxial/abaxial axis	1.79E-02
125	GO:0006289: nucleotide-excision repair	1.79E-02
126	GO:0051302: regulation of cell division	1.92E-02
127	GO:0007017: microtubule-based process	1.92E-02
128	GO:0009768: photosynthesis, light harvesting in photosystem I	1.92E-02
129	GO:0006825: copper ion transport	1.92E-02
130	GO:0009723: response to ethylene	1.94E-02
131	GO:0019915: lipid storage	2.05E-02
132	GO:0051321: meiotic cell cycle	2.05E-02
133	GO:0003333: amino acid transmembrane transport	2.05E-02
134	GO:0030245: cellulose catabolic process	2.19E-02
135	GO:0035428: hexose transmembrane transport	2.19E-02
136	GO:0019748: secondary metabolic process	2.19E-02
137	GO:0006979: response to oxidative stress	2.21E-02
138	GO:0009686: gibberellin biosynthetic process	2.33E-02
139	GO:0001944: vasculature development	2.33E-02
140	GO:0010089: xylem development	2.47E-02
141	GO:0006284: base-excision repair	2.47E-02
142	GO:0009733: response to auxin	2.65E-02
143	GO:0045892: negative regulation of transcription, DNA-templated	2.70E-02
144	GO:0042335: cuticle development	2.77E-02
145	GO:0006662: glycerol ether metabolic process	2.92E-02
146	GO:0048868: pollen tube development	2.92E-02
147	GO:0046323: glucose import	2.92E-02
148	GO:0009737: response to abscisic acid	3.09E-02
149	GO:0009751: response to salicylic acid	3.38E-02
150	GO:0055114: oxidation-reduction process	3.38E-02
151	GO:0071554: cell wall organization or biogenesis	3.39E-02
152	GO:0000302: response to reactive oxygen species	3.39E-02
153	GO:0006281: DNA repair	3.44E-02
154	GO:0010583: response to cyclopentenone	3.55E-02
155	GO:0048235: pollen sperm cell differentiation	3.55E-02
156	GO:0009790: embryo development	3.59E-02
157	GO:0030163: protein catabolic process	3.72E-02
158	GO:0071281: cellular response to iron ion	3.72E-02
159	GO:1901657: glycosyl compound metabolic process	3.72E-02
160	GO:0010252: auxin homeostasis	3.88E-02
161	GO:0008152: metabolic process	3.88E-02
162	GO:0006310: DNA recombination	3.88E-02
163	GO:0000910: cytokinesis	4.23E-02
164	GO:0007623: circadian rhythm	4.24E-02
165	GO:0045490: pectin catabolic process	4.24E-02
166	GO:0005975: carbohydrate metabolic process	4.35E-02
167	GO:0046686: response to cadmium ion	4.54E-02
168	GO:0009607: response to biotic stimulus	4.58E-02
169	GO:0009739: response to gibberellin	4.74E-02
170	GO:0009627: systemic acquired resistance	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
3	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
4	GO:0048039: ubiquinone binding	0.00E+00
5	GO:0009899: ent-kaurene synthase activity	0.00E+00
6	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
7	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
8	GO:0019843: rRNA binding	1.09E-07
9	GO:0016851: magnesium chelatase activity	4.01E-05
10	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.15E-05
11	GO:0003735: structural constituent of ribosome	1.38E-04
12	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.37E-04
13	GO:0005227: calcium activated cation channel activity	3.37E-04
14	GO:0008184: glycogen phosphorylase activity	3.37E-04
15	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	3.37E-04
16	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	3.37E-04
17	GO:0004856: xylulokinase activity	3.37E-04
18	GO:0004645: phosphorylase activity	3.37E-04
19	GO:0004853: uroporphyrinogen decarboxylase activity	3.37E-04
20	GO:0034256: chlorophyll(ide) b reductase activity	3.37E-04
21	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.37E-04
22	GO:0048038: quinone binding	4.85E-04
23	GO:0033201: alpha-1,4-glucan synthase activity	7.34E-04
24	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	7.34E-04
25	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	7.34E-04
26	GO:0003844: 1,4-alpha-glucan branching enzyme activity	7.34E-04
27	GO:0016868: intramolecular transferase activity, phosphotransferases	7.34E-04
28	GO:0010297: heteropolysaccharide binding	7.34E-04
29	GO:0044183: protein binding involved in protein folding	8.40E-04
30	GO:0047372: acylglycerol lipase activity	8.40E-04
31	GO:0004565: beta-galactosidase activity	1.08E-03
32	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.19E-03
33	GO:0043169: cation binding	1.19E-03
34	GO:0004373: glycogen (starch) synthase activity	1.19E-03
35	GO:0017150: tRNA dihydrouridine synthase activity	1.19E-03
36	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.19E-03
37	GO:0071917: triose-phosphate transmembrane transporter activity	1.19E-03
38	GO:0005528: FK506 binding	1.68E-03
39	GO:0015203: polyamine transmembrane transporter activity	1.71E-03
40	GO:0016149: translation release factor activity, codon specific	1.71E-03
41	GO:0043023: ribosomal large subunit binding	1.71E-03
42	GO:0019199: transmembrane receptor protein kinase activity	2.30E-03
43	GO:0009011: starch synthase activity	2.30E-03
44	GO:0042277: peptide binding	2.30E-03
45	GO:0015120: phosphoglycerate transmembrane transporter activity	2.30E-03
46	GO:0016279: protein-lysine N-methyltransferase activity	2.30E-03
47	GO:0030570: pectate lyase activity	2.43E-03
48	GO:0008725: DNA-3-methyladenine glycosylase activity	2.93E-03
49	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.93E-03
50	GO:2001070: starch binding	3.63E-03
51	GO:0004332: fructose-bisphosphate aldolase activity	3.63E-03
52	GO:0004130: cytochrome-c peroxidase activity	3.63E-03
53	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.37E-03
54	GO:0005261: cation channel activity	4.37E-03
55	GO:0004602: glutathione peroxidase activity	4.37E-03
56	GO:0000156: phosphorelay response regulator activity	4.69E-03
57	GO:0005337: nucleoside transmembrane transporter activity	5.99E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	5.99E-03
59	GO:0016829: lyase activity	6.77E-03
60	GO:0005375: copper ion transmembrane transporter activity	6.87E-03
61	GO:0003747: translation release factor activity	7.79E-03
62	GO:0015174: basic amino acid transmembrane transporter activity	8.75E-03
63	GO:0008047: enzyme activator activity	9.76E-03
64	GO:0009055: electron carrier activity	1.03E-02
65	GO:0003691: double-stranded telomeric DNA binding	1.08E-02
66	GO:0008378: galactosyltransferase activity	1.19E-02
67	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.19E-02
68	GO:0016491: oxidoreductase activity	1.24E-02
69	GO:0004022: alcohol dehydrogenase (NAD) activity	1.30E-02
70	GO:0051537: 2 iron, 2 sulfur cluster binding	1.38E-02
71	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.49E-02
72	GO:0031409: pigment binding	1.66E-02
73	GO:0004857: enzyme inhibitor activity	1.79E-02
74	GO:0008408: 3'-5' exonuclease activity	2.05E-02
75	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.11E-02
76	GO:0022891: substrate-specific transmembrane transporter activity	2.33E-02
77	GO:0008810: cellulase activity	2.33E-02
78	GO:0015035: protein disulfide oxidoreductase activity	2.53E-02
79	GO:0047134: protein-disulfide reductase activity	2.62E-02
80	GO:0001085: RNA polymerase II transcription factor binding	2.92E-02
81	GO:0004791: thioredoxin-disulfide reductase activity	3.07E-02
82	GO:0005355: glucose transmembrane transporter activity	3.07E-02
83	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.30E-02
84	GO:0004252: serine-type endopeptidase activity	3.42E-02
85	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.72E-02
86	GO:0015297: antiporter activity	4.05E-02
87	GO:0005200: structural constituent of cytoskeleton	4.05E-02
88	GO:0016413: O-acetyltransferase activity	4.23E-02
89	GO:0016597: amino acid binding	4.23E-02
90	GO:0016168: chlorophyll binding	4.58E-02
91	GO:0102483: scopolin beta-glucosidase activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0009507: chloroplast	1.04E-28
4	GO:0009535: chloroplast thylakoid membrane	2.88E-23
5	GO:0009570: chloroplast stroma	9.54E-20
6	GO:0009534: chloroplast thylakoid	5.08E-18
7	GO:0009941: chloroplast envelope	5.93E-14
8	GO:0009579: thylakoid	4.51E-12
9	GO:0009543: chloroplast thylakoid lumen	1.09E-07
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.34E-07
11	GO:0009501: amyloplast	1.05E-05
12	GO:0010007: magnesium chelatase complex	1.82E-05
13	GO:0031977: thylakoid lumen	2.45E-05
14	GO:0005840: ribosome	5.66E-05
15	GO:0030095: chloroplast photosystem II	8.58E-05
16	GO:0010287: plastoglobule	1.80E-04
17	GO:0009533: chloroplast stromal thylakoid	2.86E-04
18	GO:0000791: euchromatin	3.37E-04
19	GO:0009538: photosystem I reaction center	3.60E-04
20	GO:0009295: nucleoid	6.69E-04
21	GO:0030093: chloroplast photosystem I	7.34E-04
22	GO:0030870: Mre11 complex	7.34E-04
23	GO:0009508: plastid chromosome	1.08E-03
24	GO:0009654: photosystem II oxygen evolving complex	1.86E-03
25	GO:0000795: synaptonemal complex	2.93E-03
26	GO:0030915: Smc5-Smc6 complex	2.93E-03
27	GO:0009523: photosystem II	3.85E-03
28	GO:0019898: extrinsic component of membrane	3.85E-03
29	GO:0031305: integral component of mitochondrial inner membrane	5.99E-03
30	GO:0000783: nuclear telomere cap complex	6.87E-03
31	GO:0045298: tubulin complex	7.79E-03
32	GO:0005763: mitochondrial small ribosomal subunit	7.79E-03
33	GO:0005740: mitochondrial envelope	9.76E-03
34	GO:0009536: plastid	1.08E-02
35	GO:0009574: preprophase band	1.30E-02
36	GO:0030076: light-harvesting complex	1.54E-02
37	GO:0042651: thylakoid membrane	1.92E-02
38	GO:0005874: microtubule	2.02E-02
39	GO:0015935: small ribosomal subunit	2.05E-02
40	GO:0009522: photosystem I	3.07E-02
41	GO:0000785: chromatin	3.55E-02
42	GO:0010319: stromule	4.05E-02
43	GO:0005667: transcription factor complex	4.76E-02