gene detail

Gene description

TAIR ID: AT1G67660

Short description: Restriction endonuclease, type II-like superfamily protein

Pathogen responsiveness: -0.58

General responsiveness: -0.35

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G130224

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

chloroplast, nucleus

GO molecular function

DNA binding, endonuclease activity

Protein domain

Pfam	PF09588, YqaJ-like viral recombinase domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.66	9.78E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	2.08	1.15E-06
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.00	7.07E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.05	8.72E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.67	1.80E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.57	5.39E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.52	6.62E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.71	2.05E-12