Gene: AT1G63800
     

Gene description


TAIR ID: AT1G63800

Short description: ubiquitin-conjugating enzyme 5

Pathogen responsiveness: -0.24

General responsiveness: -1.77

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


ubiquitin-dependent protein catabolic process, protein ubiquitination


GO cellular component


nucleus, cytosol


GO molecular function


ubiquitin protein ligase activity, ubiquitin-protein transferase activity, ATP binding, ubiquitin protein ligase binding


Protein domain


PfamPF00179, Ubiquitin-conjugating enzyme
SMARTSM00212, UBCc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


16 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.592.26E-02
GSE17464Laer, controlLaer, Flg22 2 h-1.962.32E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.786.55E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.647.05E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.712.78E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.995.58E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.754.86E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.687.25E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.871.78E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.813.66E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.742.05E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.044.50E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.561.30E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.569.61E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.637.02E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.087.39E-04






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