gene detail

Gene description

TAIR ID: AT1G63130

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -1.88

General responsiveness: -1.69

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

mRNA processing, mitochondrial mRNA modification

GO cellular component

mitochondrion

GO molecular function

RNA binding, endonuclease activity

Protein domain

Pfam	PF01535, PPR repeat
Pfam	PF13041, PPR repeat family
Pfam	PF12854, PPR repeat

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.77	2.18E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.58	1.07E-03