gene detail

Gene description

TAIR ID: AT1G62960

Short description: ACC synthase 10

Pathogen responsiveness: -1.26

General responsiveness: 0.44

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ethylene biosynthetic process, biosynthetic process, cellular amino acid metabolic process

GO cellular component

unkown

GO molecular function

pyridoxal phosphate binding, 1-aminocyclopropane-1-carboxylate synthase activity, L-aspartate:2-oxoglutarate aminotransferase activity, transaminase activity, aromatic-amino-acid:2-oxoglutarate aminotransferase activity

Protein domain

Pfam	PF00155, Aminotransferase class I and II

Metabolic pathway

ASPARTATESYN-PWY: aspartate biosynthesis
PWY-5079: phenylalanine degradation III
ASPARTATE-DEG1-PWY: aspartate degradation I
THRESYN-PWY: threonine biosynthesis
ETHYL-PWY: ethylene biosynthesis I (plants)
ASPASN-ARA-PWY: superpathway of aspartate and asparagine biosynthesis
MALATE-ASPARTATE-SHUTTLE-PWY: aspartate degradation II
PWY-3001: isoleucine biosynthesis I
PWY-7270: Yang cycle

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G15840

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	-1.53	5.60E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.11	1.09E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.89	1.76E-13
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.97	2.58E-03