gene detail

Gene description

TAIR ID: AT1G61870

Short description: pentatricopeptide repeat 336

Pathogen responsiveness: -1.72

General responsiveness: -1.52

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

RNA modification

GO cellular component

mitochondrial inner membrane, membrane, mitochondrion

GO molecular function

nucleotide binding, RNA binding, endonuclease activity

Protein domain

Pfam	PF01535, PPR repeat
Pfam	PF13041, PPR repeat family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850, AT4G36990, AT1G76890

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

Coexpression network

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.58	2.01E-11
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.73	5.76E-03