gene detail

Gene description

TAIR ID: AT1G61140

Short description: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related

Pathogen responsiveness: -0.72

General responsiveness: -1.19

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

embryo sac development

GO cellular component

nucleus, cytoplasm

GO molecular function

helicase activity

Protein domain

Pfam	PF00176, SNF2 family N-terminal domain
Pfam	PF13923, Zinc finger, C3HC4 type (RING finger)
Pfam	PF00271, Helicase conserved C-terminal domain
SMART	SM00487, DEXDc
SMART	SM00490, HELICc
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.61	7.38E-07
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.55	4.16E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.01	2.25E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.80	1.11E-05
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.60	4.70E-09
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.22	2.07E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.13	3.46E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.11	2.94E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.08	1.39E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.58	1.16E-04