Gene: AT1G57560
     


Gene description


TAIR ID: AT1G57560

Short description: myb domain protein 50

Pathogen responsiveness: 1.69

General responsiveness: -0.58

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to gibberellin, response to jasmonic acid, regulation of transcription from RNA polymerase II promoter, cell differentiation, regulation of stomatal movement, regulation of transcription, DNA-templated, response to auxin, response to salicylic acid


GO cellular component


nucleus


GO molecular function


DNA binding, transcription factor activity, RNA polymerase II transcription factor recruiting, transcription regulatory region DNA binding, RNA polymerase II transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


38 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h3.021.04E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.333.12E-09
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h4.198.37E-07
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h4.941.10E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h4.483.87E-07
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h4.241.65E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h3.839.06E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d2.221.69E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.153.14E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.707.35E-09
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.458.78E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.383.65E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h5.181.21E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.192.99E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h5.121.77E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h4.633.90E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.307.52E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h5.316.84E-17
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.086.87E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.222.85E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.189.28E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.674.41E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h4.612.00E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.253.85E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.541.77E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.067.65E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.543.74E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.711.06E-09
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.536.24E-08
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 AvrRpt2 16 h1.553.65E-02
GSE5685Col, WT, control 24 hCol, WT, Ps ES4326 24 h1.751.75E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h4.992.11E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.388.86E-05
GSE62537Col, WT, control 48 hCol, WT, V.longisporum 48 h-2.171.31E-02
GSE62537Col, ndr1, control 48 hCol, ndr1, V.longisporum 48 h-2.191.01E-02
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d1.931.20E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h5.184.86E-07
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h4.921.02E-06






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