co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G57560

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000731: DNA synthesis involved in DNA repair	0.00E+00
2	GO:0046680: response to DDT	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0032491: detection of molecule of fungal origin	0.00E+00
5	GO:0032499: detection of peptidoglycan	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
8	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
9	GO:1902001: fatty acid transmembrane transport	0.00E+00
10	GO:0006216: cytidine catabolic process	0.00E+00
11	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
12	GO:0033198: response to ATP	0.00E+00
13	GO:0042906: xanthine transport	0.00E+00
14	GO:0046109: uridine biosynthetic process	0.00E+00
15	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
16	GO:0002238: response to molecule of fungal origin	2.44E-04
17	GO:0006499: N-terminal protein myristoylation	2.95E-04
18	GO:0010045: response to nickel cation	4.37E-04
19	GO:0042759: long-chain fatty acid biosynthetic process	4.37E-04
20	GO:0000077: DNA damage checkpoint	4.37E-04
21	GO:0042350: GDP-L-fucose biosynthetic process	4.37E-04
22	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	4.37E-04
23	GO:0033306: phytol metabolic process	4.37E-04
24	GO:1902265: abscisic acid homeostasis	4.37E-04
25	GO:0000032: cell wall mannoprotein biosynthetic process	4.37E-04
26	GO:0007165: signal transduction	5.87E-04
27	GO:0006952: defense response	8.66E-04
28	GO:0006486: protein glycosylation	8.71E-04
29	GO:0048268: clathrin coat assembly	9.07E-04
30	GO:0043066: negative regulation of apoptotic process	9.44E-04
31	GO:0005976: polysaccharide metabolic process	9.44E-04
32	GO:0010042: response to manganese ion	9.44E-04
33	GO:0051258: protein polymerization	9.44E-04
34	GO:0060919: auxin influx	9.44E-04
35	GO:0010271: regulation of chlorophyll catabolic process	9.44E-04
36	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.44E-04
37	GO:0010541: acropetal auxin transport	9.44E-04
38	GO:0071668: plant-type cell wall assembly	9.44E-04
39	GO:0006996: organelle organization	9.44E-04
40	GO:0015720: allantoin transport	9.44E-04
41	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.44E-04
42	GO:0080181: lateral root branching	9.44E-04
43	GO:0055088: lipid homeostasis	9.44E-04
44	GO:0040020: regulation of meiotic nuclear division	9.44E-04
45	GO:0015857: uracil transport	9.44E-04
46	GO:0015908: fatty acid transport	9.44E-04
47	GO:0010115: regulation of abscisic acid biosynthetic process	9.44E-04
48	GO:0002240: response to molecule of oomycetes origin	9.44E-04
49	GO:0000266: mitochondrial fission	1.39E-03
50	GO:0071705: nitrogen compound transport	1.54E-03
51	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.54E-03
52	GO:0015783: GDP-fucose transport	1.54E-03
53	GO:0033591: response to L-ascorbic acid	1.54E-03
54	GO:0015695: organic cation transport	1.54E-03
55	GO:1900055: regulation of leaf senescence	1.54E-03
56	GO:0010498: proteasomal protein catabolic process	1.54E-03
57	GO:0034605: cellular response to heat	1.78E-03
58	GO:0002237: response to molecule of bacterial origin	1.78E-03
59	GO:0042742: defense response to bacterium	1.87E-03
60	GO:0070588: calcium ion transmembrane transport	2.00E-03
61	GO:0010043: response to zinc ion	2.12E-03
62	GO:0015696: ammonium transport	2.22E-03
63	GO:0071323: cellular response to chitin	2.22E-03
64	GO:0046513: ceramide biosynthetic process	2.22E-03
65	GO:0009298: GDP-mannose biosynthetic process	2.22E-03
66	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.22E-03
67	GO:0010306: rhamnogalacturonan II biosynthetic process	2.22E-03
68	GO:0009226: nucleotide-sugar biosynthetic process	2.22E-03
69	GO:0006468: protein phosphorylation	2.70E-03
70	GO:0009687: abscisic acid metabolic process	2.99E-03
71	GO:0045227: capsule polysaccharide biosynthetic process	2.99E-03
72	GO:0045088: regulation of innate immune response	2.99E-03
73	GO:0072488: ammonium transmembrane transport	2.99E-03
74	GO:0033358: UDP-L-arabinose biosynthetic process	2.99E-03
75	GO:0071219: cellular response to molecule of bacterial origin	2.99E-03
76	GO:0033356: UDP-L-arabinose metabolic process	2.99E-03
77	GO:0051707: response to other organism	3.29E-03
78	GO:0009229: thiamine diphosphate biosynthetic process	3.83E-03
79	GO:0009435: NAD biosynthetic process	3.83E-03
80	GO:0016094: polyprenol biosynthetic process	3.83E-03
81	GO:0006465: signal peptide processing	3.83E-03
82	GO:0009247: glycolipid biosynthetic process	3.83E-03
83	GO:0042391: regulation of membrane potential	4.56E-03
84	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.74E-03
85	GO:0033365: protein localization to organelle	4.74E-03
86	GO:0010337: regulation of salicylic acid metabolic process	4.74E-03
87	GO:0009228: thiamine biosynthetic process	4.74E-03
88	GO:0009972: cytidine deamination	4.74E-03
89	GO:0010405: arabinogalactan protein metabolic process	4.74E-03
90	GO:0010315: auxin efflux	4.74E-03
91	GO:0045491: xylan metabolic process	4.74E-03
92	GO:0080036: regulation of cytokinin-activated signaling pathway	5.72E-03
93	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	5.72E-03
94	GO:0010038: response to metal ion	6.76E-03
95	GO:0046470: phosphatidylcholine metabolic process	6.76E-03
96	GO:0071446: cellular response to salicylic acid stimulus	6.76E-03
97	GO:1900056: negative regulation of leaf senescence	6.76E-03
98	GO:0009850: auxin metabolic process	7.86E-03
99	GO:0043068: positive regulation of programmed cell death	7.86E-03
100	GO:0019375: galactolipid biosynthetic process	7.86E-03
101	GO:0016559: peroxisome fission	7.86E-03
102	GO:0009819: drought recovery	7.86E-03
103	GO:0006367: transcription initiation from RNA polymerase II promoter	9.03E-03
104	GO:0006261: DNA-dependent DNA replication	9.03E-03
105	GO:0006997: nucleus organization	9.03E-03
106	GO:0010204: defense response signaling pathway, resistance gene-independent	9.03E-03
107	GO:0009808: lignin metabolic process	9.03E-03
108	GO:0010208: pollen wall assembly	9.03E-03
109	GO:0050832: defense response to fungus	1.01E-02
110	GO:0046916: cellular transition metal ion homeostasis	1.03E-02
111	GO:0010112: regulation of systemic acquired resistance	1.03E-02
112	GO:0009060: aerobic respiration	1.03E-02
113	GO:0009056: catabolic process	1.03E-02
114	GO:0015780: nucleotide-sugar transport	1.03E-02
115	GO:0010332: response to gamma radiation	1.03E-02
116	GO:0019432: triglyceride biosynthetic process	1.03E-02
117	GO:0016311: dephosphorylation	1.10E-02
118	GO:0030244: cellulose biosynthetic process	1.15E-02
119	GO:1900426: positive regulation of defense response to bacterium	1.15E-02
120	GO:0009817: defense response to fungus, incompatible interaction	1.15E-02
121	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.15E-02
122	GO:0010380: regulation of chlorophyll biosynthetic process	1.15E-02
123	GO:0000103: sulfate assimilation	1.29E-02
124	GO:0043069: negative regulation of programmed cell death	1.29E-02
125	GO:0030148: sphingolipid biosynthetic process	1.43E-02
126	GO:0000038: very long-chain fatty acid metabolic process	1.43E-02
127	GO:0009682: induced systemic resistance	1.43E-02
128	GO:0009867: jasmonic acid mediated signaling pathway	1.47E-02
129	GO:0010150: leaf senescence	1.52E-02
130	GO:0045037: protein import into chloroplast stroma	1.57E-02
131	GO:0006790: sulfur compound metabolic process	1.57E-02
132	GO:0012501: programmed cell death	1.57E-02
133	GO:0010102: lateral root morphogenesis	1.72E-02
134	GO:0055046: microgametogenesis	1.72E-02
135	GO:0006897: endocytosis	1.75E-02
136	GO:0007034: vacuolar transport	1.87E-02
137	GO:0010540: basipetal auxin transport	1.87E-02
138	GO:0000209: protein polyubiquitination	1.97E-02
139	GO:0019853: L-ascorbic acid biosynthetic process	2.03E-02
140	GO:0010030: positive regulation of seed germination	2.03E-02
141	GO:0046854: phosphatidylinositol phosphorylation	2.03E-02
142	GO:0010053: root epidermal cell differentiation	2.03E-02
143	GO:0009225: nucleotide-sugar metabolic process	2.03E-02
144	GO:0010167: response to nitrate	2.03E-02
145	GO:0034976: response to endoplasmic reticulum stress	2.20E-02
146	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.30E-02
147	GO:0080147: root hair cell development	2.36E-02
148	GO:0006289: nucleotide-excision repair	2.36E-02
149	GO:2000377: regulation of reactive oxygen species metabolic process	2.36E-02
150	GO:0003333: amino acid transmembrane transport	2.71E-02
151	GO:0006334: nucleosome assembly	2.71E-02
152	GO:0007005: mitochondrion organization	2.89E-02
153	GO:0009814: defense response, incompatible interaction	2.89E-02
154	GO:0006012: galactose metabolic process	3.08E-02
155	GO:0009561: megagametogenesis	3.27E-02
156	GO:0010584: pollen exine formation	3.27E-02
157	GO:0045492: xylan biosynthetic process	3.27E-02
158	GO:0006284: base-excision repair	3.27E-02
159	GO:0070417: cellular response to cold	3.46E-02
160	GO:0008033: tRNA processing	3.66E-02
161	GO:0000413: protein peptidyl-prolyl isomerization	3.66E-02
162	GO:0046777: protein autophosphorylation	3.74E-02
163	GO:0044550: secondary metabolite biosynthetic process	3.82E-02
164	GO:0006662: glycerol ether metabolic process	3.86E-02
165	GO:0071472: cellular response to salt stress	3.86E-02
166	GO:0048544: recognition of pollen	4.06E-02
167	GO:0009646: response to absence of light	4.06E-02
168	GO:0035556: intracellular signal transduction	4.21E-02
169	GO:0009749: response to glucose	4.27E-02
170	GO:0000302: response to reactive oxygen species	4.48E-02
171	GO:0010193: response to ozone	4.48E-02
172	GO:0016032: viral process	4.69E-02
173	GO:0009630: gravitropism	4.69E-02
174	GO:0007264: small GTPase mediated signal transduction	4.69E-02
175	GO:0030163: protein catabolic process	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0047844: deoxycytidine deaminase activity	0.00E+00
2	GO:0005212: structural constituent of eye lens	0.00E+00
3	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:2001080: chitosan binding	0.00E+00
7	GO:0034338: short-chain carboxylesterase activity	0.00E+00
8	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
9	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
10	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
11	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
12	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
13	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
14	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
15	GO:0008734: L-aspartate oxidase activity	0.00E+00
16	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
17	GO:0016301: kinase activity	1.19E-04
18	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.71E-04
19	GO:0004476: mannose-6-phosphate isomerase activity	4.37E-04
20	GO:0019707: protein-cysteine S-acyltransferase activity	4.37E-04
21	GO:0046481: digalactosyldiacylglycerol synthase activity	4.37E-04
22	GO:0015245: fatty acid transporter activity	4.37E-04
23	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.37E-04
24	GO:0004649: poly(ADP-ribose) glycohydrolase activity	4.37E-04
25	GO:0050577: GDP-L-fucose synthase activity	4.37E-04
26	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.61E-04
27	GO:0030775: glucuronoxylan 4-O-methyltransferase activity	9.44E-04
28	GO:0005274: allantoin uptake transmembrane transporter activity	9.44E-04
29	GO:0050291: sphingosine N-acyltransferase activity	9.44E-04
30	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	9.44E-04
31	GO:0045140: inositol phosphoceramide synthase activity	9.44E-04
32	GO:0005545: 1-phosphatidylinositol binding	1.06E-03
33	GO:0004751: ribose-5-phosphate isomerase activity	1.54E-03
34	GO:0005457: GDP-fucose transmembrane transporter activity	1.54E-03
35	GO:0000030: mannosyltransferase activity	1.54E-03
36	GO:0016174: NAD(P)H oxidase activity	1.54E-03
37	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.54E-03
38	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.58E-03
39	GO:0030552: cAMP binding	2.00E-03
40	GO:0030553: cGMP binding	2.00E-03
41	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.22E-03
42	GO:0035529: NADH pyrophosphatase activity	2.22E-03
43	GO:0035250: UDP-galactosyltransferase activity	2.22E-03
44	GO:0005216: ion channel activity	2.73E-03
45	GO:0050373: UDP-arabinose 4-epimerase activity	2.99E-03
46	GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly	2.99E-03
47	GO:0015210: uracil transmembrane transporter activity	2.99E-03
48	GO:0010328: auxin influx transmembrane transporter activity	2.99E-03
49	GO:0019199: transmembrane receptor protein kinase activity	2.99E-03
50	GO:0004623: phospholipase A2 activity	3.83E-03
51	GO:0047631: ADP-ribose diphosphatase activity	3.83E-03
52	GO:0008725: DNA-3-methyladenine glycosylase activity	3.83E-03
53	GO:0010294: abscisic acid glucosyltransferase activity	3.83E-03
54	GO:0002094: polyprenyltransferase activity	3.83E-03
55	GO:0005102: receptor binding	4.22E-03
56	GO:0005249: voltage-gated potassium channel activity	4.56E-03
57	GO:0030551: cyclic nucleotide binding	4.56E-03
58	GO:0035252: UDP-xylosyltransferase activity	4.74E-03
59	GO:0008519: ammonium transmembrane transporter activity	4.74E-03
60	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.74E-03
61	GO:0047714: galactolipase activity	4.74E-03
62	GO:0000210: NAD+ diphosphatase activity	4.74E-03
63	GO:0030276: clathrin binding	4.92E-03
64	GO:0009927: histidine phosphotransfer kinase activity	5.72E-03
65	GO:0003978: UDP-glucose 4-epimerase activity	5.72E-03
66	GO:0004144: diacylglycerol O-acyltransferase activity	5.72E-03
67	GO:0004126: cytidine deaminase activity	5.72E-03
68	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.72E-03
69	GO:0004012: phospholipid-translocating ATPase activity	5.72E-03
70	GO:0008320: protein transmembrane transporter activity	6.76E-03
71	GO:0004674: protein serine/threonine kinase activity	7.24E-03
72	GO:0004708: MAP kinase kinase activity	7.86E-03
73	GO:0004630: phospholipase D activity	9.03E-03
74	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	9.03E-03
75	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	9.03E-03
76	GO:0008375: acetylglucosaminyltransferase activity	9.86E-03
77	GO:0071949: FAD binding	1.03E-02
78	GO:0004806: triglyceride lipase activity	1.04E-02
79	GO:0004252: serine-type endopeptidase activity	1.15E-02
80	GO:0008559: xenobiotic-transporting ATPase activity	1.43E-02
81	GO:0000049: tRNA binding	1.57E-02
82	GO:0015198: oligopeptide transporter activity	1.57E-02
83	GO:0008378: galactosyltransferase activity	1.57E-02
84	GO:0010329: auxin efflux transmembrane transporter activity	1.72E-02
85	GO:0031072: heat shock protein binding	1.72E-02
86	GO:0005262: calcium channel activity	1.72E-02
87	GO:0005388: calcium-transporting ATPase activity	1.72E-02
88	GO:0008194: UDP-glycosyltransferase activity	1.75E-02
89	GO:0004190: aspartic-type endopeptidase activity	2.03E-02
90	GO:0008061: chitin binding	2.03E-02
91	GO:0030246: carbohydrate binding	2.12E-02
92	GO:0003887: DNA-directed DNA polymerase activity	2.20E-02
93	GO:0008134: transcription factor binding	2.36E-02
94	GO:0043424: protein histidine kinase binding	2.54E-02
95	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.71E-02
96	GO:0008408: 3'-5' exonuclease activity	2.71E-02
97	GO:0004842: ubiquitin-protein transferase activity	2.87E-02
98	GO:0003756: protein disulfide isomerase activity	3.27E-02
99	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.27E-02
100	GO:0047134: protein-disulfide reductase activity	3.46E-02
101	GO:0008270: zinc ion binding	3.75E-02
102	GO:0004527: exonuclease activity	3.86E-02
103	GO:0003713: transcription coactivator activity	3.86E-02
104	GO:0010181: FMN binding	4.06E-02
105	GO:0050662: coenzyme binding	4.06E-02
106	GO:0004791: thioredoxin-disulfide reductase activity	4.06E-02
107	GO:0016853: isomerase activity	4.06E-02
108	GO:0019901: protein kinase binding	4.27E-02
109	GO:0042803: protein homodimerization activity	4.55E-02
110	GO:0004871: signal transducer activity	4.55E-02
111	GO:0004197: cysteine-type endopeptidase activity	4.69E-02
112	GO:0004722: protein serine/threonine phosphatase activity	4.81E-02
113	GO:0003824: catalytic activity	4.86E-02
114	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.91E-02