gene detail

Gene description

TAIR ID: AT1G56450

Short description: 20S proteasome beta subunit G1

Pathogen responsiveness: -1.69

General responsiveness: -2.61

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G023080

Wheat: No orthologous gene

GO biological process

response to salt stress, ubiquitin-dependent protein catabolic process, proteolysis involved in cellular protein catabolic process, response to cadmium ion

GO cellular component

nucleus, proteasome core complex, cytosolic ribosome, cytosol, cytoplasm

GO molecular function

peptidase activity, threonine-type endopeptidase activity

Protein domain

Pfam	PF00227, Proteasome subunit

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03050: Proteasome

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.18	1.25E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.00	4.25E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.98	4.63E-15
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.95	2.45E-08

Showing 1 to 4 of 4 entries

Previous1Next