Gene: AT1G55110
     

Gene description


TAIR ID: AT1G55110

Short description: indeterminate(ID)-domain 7

Pathogen responsiveness: -1.40

General responsiveness: -1.51

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G143723  

Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription


GO cellular component


nucleus


GO molecular function


metal ion binding, DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF12171, Zinc-finger double-stranded RNA-binding
SMARTSM00355, ZnF_C2H2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600, AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.514.67E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.577.62E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.018.42E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.844.13E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.971.56E-12






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