Gene: AT1G54690
Gene description
TAIR ID: AT1G54690
Short description: gamma histone variant H2AX
Pathogen responsiveness: -1.38
General responsiveness: -0.74
GO biological process
chromatin silencing
GO cellular component
nucleus, nucleolus, nuclear chromatin, nucleosome
GO molecular function
protein heterodimerization activity, DNA binding
Protein domain
| Pfam | PF00125, Core histone H2A/H2B/H3/H4 |
| Pfam | PF16211, C-terminus of histone H2A |
| SMART | SM00414, H2A |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
6 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -2.16 | 2.17E-06 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -1.78 | 1.52E-03 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | -1.51 | 1.36E-02 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -1.62 | 5.86E-04 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | -1.69 | 3.69E-15 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | -1.66 | 1.24E-14 |
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