Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G54690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072321: chaperone-mediated protein transport0.00E+00
2GO:0000494: box C/D snoRNA 3'-end processing2.32E-06
3GO:1990258: histone glutamine methylation2.32E-06
4GO:0045039: protein import into mitochondrial inner membrane1.23E-05
5GO:1902626: assembly of large subunit precursor of preribosome1.23E-05
6GO:0006986: response to unfolded protein1.94E-05
7GO:0051085: chaperone mediated protein folding requiring cofactor1.94E-05
8GO:0031167: rRNA methylation3.71E-05
9GO:0001510: RNA methylation9.62E-05
10GO:0042254: ribosome biogenesis1.15E-04
11GO:0006626: protein targeting to mitochondrion1.86E-04
12GO:0048467: gynoecium development2.03E-04
13GO:0000027: ribosomal large subunit assembly2.54E-04
14GO:0008033: tRNA processing3.84E-04
15GO:0006412: translation3.86E-04
16GO:0006364: rRNA processing1.16E-03
17GO:0009408: response to heat4.23E-03
18GO:0009734: auxin-activated signaling pathway5.35E-03
19GO:0006457: protein folding7.50E-03
20GO:0006414: translational elongation8.28E-03
21GO:0006351: transcription, DNA-templated4.05E-02
RankGO TermAdjusted P value
1GO:1990259: histone-glutamine methyltransferase activity2.32E-06
2GO:0008649: rRNA methyltransferase activity1.23E-05
3GO:0030515: snoRNA binding7.04E-05
4GO:0003735: structural constituent of ribosome1.04E-04
5GO:0001055: RNA polymerase II activity1.24E-04
6GO:0001054: RNA polymerase I activity1.54E-04
7GO:0001056: RNA polymerase III activity1.70E-04
8GO:0051087: chaperone binding2.72E-04
9GO:0005507: copper ion binding5.41E-04
10GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity6.99E-04
11GO:0003697: single-stranded DNA binding8.13E-04
12GO:0003746: translation elongation factor activity8.13E-04
13GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.16E-03
14GO:0051082: unfolded protein binding1.46E-03
15GO:0019843: rRNA binding1.69E-03
16GO:0008565: protein transporter activity1.90E-03
17GO:0003729: mRNA binding1.36E-02
18GO:0003723: RNA binding4.44E-02
RankGO TermAdjusted P value
1GO:0042719: mitochondrial intermembrane space protein transporter complex0.00E+00
2GO:0005840: ribosome3.96E-05
3GO:0031428: box C/D snoRNP complex4.74E-05
4GO:0005730: nucleolus8.18E-05
5GO:0005736: DNA-directed RNA polymerase I complex1.10E-04
6GO:0005666: DNA-directed RNA polymerase III complex1.24E-04
7GO:0015030: Cajal body1.24E-04
8GO:0000418: DNA-directed RNA polymerase IV complex1.39E-04
9GO:0022625: cytosolic large ribosomal subunit1.51E-04
10GO:0032040: small-subunit processome1.70E-04
11GO:0005665: DNA-directed RNA polymerase II, core complex1.70E-04
12GO:0009508: plastid chromosome1.86E-04
13GO:0000419: DNA-directed RNA polymerase V complex2.37E-04
14GO:0005758: mitochondrial intermembrane space2.54E-04
15GO:0009295: nucleoid5.46E-04
16GO:0005747: mitochondrial respiratory chain complex I1.32E-03
17GO:0005732: small nucleolar ribonucleoprotein complex1.54E-03
18GO:0005759: mitochondrial matrix1.97E-03
19GO:0005743: mitochondrial inner membrane4.02E-03
20GO:0022626: cytosolic ribosome6.08E-03
21GO:0009536: plastid1.19E-02
22GO:0005739: mitochondrion1.47E-02
23GO:0009507: chloroplast2.03E-02
24GO:0005774: vacuolar membrane2.48E-02
25GO:0005618: cell wall2.74E-02
26GO:0005773: vacuole3.37E-02
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Gene type



Gene DE type