Gene: AT1G54440
     


Gene description


TAIR ID: AT1G54440

Short description: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain

Pathogen responsiveness: -2.40

General responsiveness: -2.69

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


methylation-dependent chromatin silencing, positive regulation of production of siRNA involved in RNA interference, positive regulation of transcription from RNA polymerase V promoter, RNA-directed DNA methylation, regulation of DNA methylation, RNA localization to chromatin, positive regulation of histone H3-K27 trimethylation


GO cellular component


nucleus, intracellular, nucleolus, nucleoplasm


GO molecular function


nucleotide binding, 3'-5'-exoribonuclease activity, 3'-5' exonuclease activity, transferase activity, nucleic acid binding


Protein domain


PfamPF00570, HRDC domain
PfamPF01612, 3'-5' exonuclease
SMARTSM00341, HRDC
SMARTSM00474, 35EXOc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G14230

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


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