Gene: AT1G54270
     


Gene description


TAIR ID: AT1G54270

Short description: eif4a-2

Pathogen responsiveness: -2.47

General responsiveness: -2.63

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


translational initiation, response to cadmium ion, RNA secondary structure unwinding, regulation of gene expression


GO cellular component


vacuolar membrane, cytosol, plasma membrane, cytoplasm, nucleolus, plasmodesma


GO molecular function


nucleic acid binding, ATP binding, ATP-dependent RNA helicase activity, translation initiation factor activity, ATP-dependent helicase activity, helicase activity


Protein domain


PfamPF00270, DEAD/DEAH box helicase
PfamPF00271, Helicase conserved C-terminal domain
SMARTSM00490, HELICc
SMARTSM00487, DEXDc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.554.35E-10






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.