GO Enrichment Analysis of Co-expressed Genes with
AT1G54270
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 2 | GO:0009423: chorismate biosynthetic process | 4.23E-06 |
| 3 | GO:0006413: translational initiation | 4.37E-06 |
| 4 | GO:0009073: aromatic amino acid family biosynthetic process | 2.37E-05 |
| 5 | GO:0080173: male-female gamete recognition during double fertilization | 2.88E-05 |
| 6 | GO:1902182: shoot apical meristem development | 2.88E-05 |
| 7 | GO:0019305: dTDP-rhamnose biosynthetic process | 2.88E-05 |
| 8 | GO:0043609: regulation of carbon utilization | 2.88E-05 |
| 9 | GO:0006430: lysyl-tRNA aminoacylation | 2.88E-05 |
| 10 | GO:1990641: response to iron ion starvation | 2.88E-05 |
| 11 | GO:0009793: embryo development ending in seed dormancy | 2.99E-05 |
| 12 | GO:0019632: shikimate metabolic process | 7.28E-05 |
| 13 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.28E-05 |
| 14 | GO:0006423: cysteinyl-tRNA aminoacylation | 7.28E-05 |
| 15 | GO:0006101: citrate metabolic process | 7.28E-05 |
| 16 | GO:0030187: melatonin biosynthetic process | 7.28E-05 |
| 17 | GO:0080009: mRNA methylation | 7.28E-05 |
| 18 | GO:0031538: negative regulation of anthocyanin metabolic process | 7.28E-05 |
| 19 | GO:0031204: posttranslational protein targeting to membrane, translocation | 7.28E-05 |
| 20 | GO:0051262: protein tetramerization | 7.28E-05 |
| 21 | GO:0019521: D-gluconate metabolic process | 7.28E-05 |
| 22 | GO:0006556: S-adenosylmethionine biosynthetic process | 1.27E-04 |
| 23 | GO:0016104: triterpenoid biosynthetic process | 1.27E-04 |
| 24 | GO:0007276: gamete generation | 1.89E-04 |
| 25 | GO:0071329: cellular response to sucrose stimulus | 1.89E-04 |
| 26 | GO:0043967: histone H4 acetylation | 1.89E-04 |
| 27 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.57E-04 |
| 28 | GO:0046345: abscisic acid catabolic process | 2.57E-04 |
| 29 | GO:0033320: UDP-D-xylose biosynthetic process | 2.57E-04 |
| 30 | GO:0006097: glyoxylate cycle | 3.30E-04 |
| 31 | GO:0006099: tricarboxylic acid cycle | 3.97E-04 |
| 32 | GO:0006139: nucleobase-containing compound metabolic process | 4.06E-04 |
| 33 | GO:0043248: proteasome assembly | 4.06E-04 |
| 34 | GO:0042732: D-xylose metabolic process | 4.06E-04 |
| 35 | GO:0043966: histone H3 acetylation | 4.86E-04 |
| 36 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.86E-04 |
| 37 | GO:0015977: carbon fixation | 4.86E-04 |
| 38 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 5.68E-04 |
| 39 | GO:0006368: transcription elongation from RNA polymerase II promoter | 5.68E-04 |
| 40 | GO:0010928: regulation of auxin mediated signaling pathway | 6.55E-04 |
| 41 | GO:0035265: organ growth | 6.55E-04 |
| 42 | GO:0006875: cellular metal ion homeostasis | 6.55E-04 |
| 43 | GO:0006102: isocitrate metabolic process | 6.55E-04 |
| 44 | GO:0009880: embryonic pattern specification | 7.44E-04 |
| 45 | GO:0046686: response to cadmium ion | 7.65E-04 |
| 46 | GO:0006098: pentose-phosphate shunt | 8.35E-04 |
| 47 | GO:2000024: regulation of leaf development | 8.35E-04 |
| 48 | GO:0051555: flavonol biosynthetic process | 1.03E-03 |
| 49 | GO:0006352: DNA-templated transcription, initiation | 1.13E-03 |
| 50 | GO:0010152: pollen maturation | 1.23E-03 |
| 51 | GO:0055046: microgametogenesis | 1.34E-03 |
| 52 | GO:0016036: cellular response to phosphate starvation | 1.43E-03 |
| 53 | GO:0009225: nucleotide-sugar metabolic process | 1.56E-03 |
| 54 | GO:0006874: cellular calcium ion homeostasis | 1.92E-03 |
| 55 | GO:0010073: meristem maintenance | 1.92E-03 |
| 56 | GO:0051302: regulation of cell division | 1.92E-03 |
| 57 | GO:0006730: one-carbon metabolic process | 2.17E-03 |
| 58 | GO:0009693: ethylene biosynthetic process | 2.30E-03 |
| 59 | GO:0009651: response to salt stress | 2.42E-03 |
| 60 | GO:0009561: megagametogenesis | 2.43E-03 |
| 61 | GO:0008284: positive regulation of cell proliferation | 2.57E-03 |
| 62 | GO:0048366: leaf development | 2.75E-03 |
| 63 | GO:0006342: chromatin silencing | 2.84E-03 |
| 64 | GO:0016192: vesicle-mediated transport | 3.04E-03 |
| 65 | GO:0030163: protein catabolic process | 3.58E-03 |
| 66 | GO:0071281: cellular response to iron ion | 3.58E-03 |
| 67 | GO:0032259: methylation | 4.07E-03 |
| 68 | GO:0016126: sterol biosynthetic process | 4.21E-03 |
| 69 | GO:0008152: metabolic process | 4.68E-03 |
| 70 | GO:0006839: mitochondrial transport | 6.50E-03 |
| 71 | GO:0009640: photomorphogenesis | 7.08E-03 |
| 72 | GO:0008283: cell proliferation | 7.08E-03 |
| 73 | GO:0051301: cell division | 8.18E-03 |
| 74 | GO:0009846: pollen germination | 8.29E-03 |
| 75 | GO:0009809: lignin biosynthetic process | 8.71E-03 |
| 76 | GO:0006364: rRNA processing | 8.71E-03 |
| 77 | GO:0006417: regulation of translation | 9.36E-03 |
| 78 | GO:0009909: regulation of flower development | 9.36E-03 |
| 79 | GO:0006457: protein folding | 9.73E-03 |
| 80 | GO:0006096: glycolytic process | 9.79E-03 |
| 81 | GO:0006979: response to oxidative stress | 1.54E-02 |
| 82 | GO:0010150: leaf senescence | 1.64E-02 |
| 83 | GO:0015979: photosynthesis | 2.87E-02 |
| 84 | GO:0016042: lipid catabolic process | 3.38E-02 |
| 85 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.21E-02 |
| 86 | GO:0009734: auxin-activated signaling pathway | 4.40E-02 |
| 87 | GO:0009908: flower development | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047763: caffeate O-methyltransferase activity | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0030755: quercetin 3-O-methyltransferase activity | 0.00E+00 |
| 4 | GO:0004421: hydroxymethylglutaryl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0030744: luteolin O-methyltransferase activity | 0.00E+00 |
| 6 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 7 | GO:0033799: myricetin 3'-O-methyltransferase activity | 0.00E+00 |
| 8 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 9 | GO:0003743: translation initiation factor activity | 7.06E-06 |
| 10 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 2.88E-05 |
| 11 | GO:0017096: acetylserotonin O-methyltransferase activity | 2.88E-05 |
| 12 | GO:0004824: lysine-tRNA ligase activity | 2.88E-05 |
| 13 | GO:0030371: translation repressor activity | 2.88E-05 |
| 14 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 7.28E-05 |
| 15 | GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity | 7.28E-05 |
| 16 | GO:0043021: ribonucleoprotein complex binding | 7.28E-05 |
| 17 | GO:0003994: aconitate hydratase activity | 7.28E-05 |
| 18 | GO:0004817: cysteine-tRNA ligase activity | 7.28E-05 |
| 19 | GO:0019829: cation-transporting ATPase activity | 1.27E-04 |
| 20 | GO:0008964: phosphoenolpyruvate carboxylase activity | 1.27E-04 |
| 21 | GO:0004478: methionine adenosyltransferase activity | 1.27E-04 |
| 22 | GO:0042300: beta-amyrin synthase activity | 1.27E-04 |
| 23 | GO:0042299: lupeol synthase activity | 1.89E-04 |
| 24 | GO:0000993: RNA polymerase II core binding | 2.57E-04 |
| 25 | GO:0046527: glucosyltransferase activity | 2.57E-04 |
| 26 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.85E-04 |
| 27 | GO:0031369: translation initiation factor binding | 4.06E-04 |
| 28 | GO:0048040: UDP-glucuronate decarboxylase activity | 4.06E-04 |
| 29 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 4.86E-04 |
| 30 | GO:0070403: NAD+ binding | 4.86E-04 |
| 31 | GO:0030515: snoRNA binding | 5.68E-04 |
| 32 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 8.34E-04 |
| 33 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 8.34E-04 |
| 34 | GO:0030955: potassium ion binding | 9.29E-04 |
| 35 | GO:0004743: pyruvate kinase activity | 9.29E-04 |
| 36 | GO:0000166: nucleotide binding | 1.03E-03 |
| 37 | GO:0001054: RNA polymerase I activity | 1.13E-03 |
| 38 | GO:0015114: phosphate ion transmembrane transporter activity | 1.34E-03 |
| 39 | GO:0005388: calcium-transporting ATPase activity | 1.34E-03 |
| 40 | GO:0008194: UDP-glycosyltransferase activity | 1.70E-03 |
| 41 | GO:0043130: ubiquitin binding | 1.79E-03 |
| 42 | GO:0004402: histone acetyltransferase activity | 2.70E-03 |
| 43 | GO:0010181: FMN binding | 2.99E-03 |
| 44 | GO:0003729: mRNA binding | 4.11E-03 |
| 45 | GO:0042393: histone binding | 6.50E-03 |
| 46 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.50E-03 |
| 47 | GO:0050661: NADP binding | 6.50E-03 |
| 48 | GO:0005198: structural molecule activity | 7.68E-03 |
| 49 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.71E-03 |
| 50 | GO:0008565: protein transporter activity | 1.48E-02 |
| 51 | GO:0003824: catalytic activity | 1.67E-02 |
| 52 | GO:0008168: methyltransferase activity | 2.18E-02 |
| 53 | GO:0000287: magnesium ion binding | 2.21E-02 |
| 54 | GO:0016788: hydrolase activity, acting on ester bonds | 2.27E-02 |
| 55 | GO:0052689: carboxylic ester hydrolase activity | 2.80E-02 |
| 56 | GO:0005515: protein binding | 3.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 2 | GO:0034455: t-UTP complex | 0.00E+00 |
| 3 | GO:0036396: MIS complex | 0.00E+00 |
| 4 | GO:0005829: cytosol | 4.39E-10 |
| 5 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.37E-05 |
| 6 | GO:0008023: transcription elongation factor complex | 2.88E-05 |
| 7 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 2.88E-05 |
| 8 | GO:0070545: PeBoW complex | 7.28E-05 |
| 9 | GO:0033588: Elongator holoenzyme complex | 1.89E-04 |
| 10 | GO:0031597: cytosolic proteasome complex | 4.86E-04 |
| 11 | GO:0030687: preribosome, large subunit precursor | 5.68E-04 |
| 12 | GO:0000123: histone acetyltransferase complex | 5.68E-04 |
| 13 | GO:0031982: vesicle | 6.55E-04 |
| 14 | GO:0005737: cytoplasm | 6.81E-04 |
| 15 | GO:0008180: COP9 signalosome | 8.35E-04 |
| 16 | GO:0005736: DNA-directed RNA polymerase I complex | 8.35E-04 |
| 17 | GO:0005730: nucleolus | 8.65E-04 |
| 18 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.13E-03 |
| 19 | GO:0032040: small-subunit processome | 1.23E-03 |
| 20 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.56E-03 |
| 21 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.56E-03 |
| 22 | GO:0032580: Golgi cisterna membrane | 3.73E-03 |
| 23 | GO:0043231: intracellular membrane-bounded organelle | 4.68E-03 |
| 24 | GO:0009506: plasmodesma | 5.37E-03 |
| 25 | GO:0000502: proteasome complex | 8.71E-03 |
| 26 | GO:0016607: nuclear speck | 1.00E-02 |
| 27 | GO:0009570: chloroplast stroma | 2.69E-02 |
| 28 | GO:0005783: endoplasmic reticulum | 2.91E-02 |
| 29 | GO:0005743: mitochondrial inner membrane | 3.27E-02 |
| 30 | GO:0005887: integral component of plasma membrane | 4.29E-02 |