gene detail

Gene description

TAIR ID: AT1G53430

Short description: Leucine-rich repeat transmembrane protein kinase

Pathogen responsiveness: -0.06

General responsiveness: -0.65

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation

GO cellular component

integral component of membrane, plasma membrane

GO molecular function

protein kinase activity, ATP binding, kinase activity

Protein domain

Pfam	PF07714, Protein tyrosine kinase
Pfam	PF00560, Leucine Rich Repeat
Pfam	PF11721, Di-glucose binding within endoplasmic reticulum
SMART	SM00369, LRR_TYP
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

19 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	1.74	3.83E-07
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.66	4.14E-07
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	1.95	2.56E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.30	1.77E-02
GSE17464	Laer, control	Laer, PstDC3000 12 h	-2.72	2.25E-09
GSE17464	Laer, control	Laer, Flg22 1 h	1.57	2.12E-04
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.48	2.11E-08
GSE17464	Penta, control	Penta, Flg22 2 h	1.53	2.82E-04
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.65	2.51E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.66	2.25E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.69	1.45E-02
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.17	9.32E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.73	3.88E-09
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.93	6.67E-11
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.00	3.51E-11
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.58	2.99E-06
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.34	1.18E-09
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	1.51	1.87E-06
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.71	1.63E-07