gene detail

Gene description

TAIR ID: AT1G53300

Short description: tetratricopetide-repeat thioredoxin-like 1

Pathogen responsiveness: -1.65

General responsiveness: -1.72

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G166612 GRMZM2G135089 GRMZM2G112659

Wheat: No orthologous gene

GO biological process

cell redox homeostasis, positive regulation of abscisic acid-activated signaling pathway, response to osmotic stress, response to salt stress, abscisic acid-activated signaling pathway, response to abscisic acid

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF00085, Thioredoxin
Pfam	PF13181, Tetratricopeptide repeat
Pfam	PF13414, TPR repeat
Pfam	PF00515, Tetratricopeptide repeat
SMART	SM00028, TPR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

No regulation information

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.70	3.17E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.88	3.91E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.55	2.19E-02
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.82	7.91E-04