gene detail

Gene description

TAIR ID: AT1G52770

Short description: Phototropic-responsive NPH3 family protein

Pathogen responsiveness: -1.29

General responsiveness: -0.64

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to light stimulus

GO cellular component

plasma membrane

GO molecular function

signal transducer activity

Protein domain

Pfam	PF03000, NPH3 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770, AT5G14750

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

GSE13739_WT_GO view
GSE13739_EDS16_GO view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	1.58	3.45E-04
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	2.10	4.56E-06
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.80	7.95E-05
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	2.13	9.33E-03
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-2.75	4.77E-02
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	-1.52	3.78E-07