gene detail

Gene description

TAIR ID: AT1G52240

Short description: RHO guanyl-nucleotide exchange factor 11

Pathogen responsiveness: -0.54

General responsiveness: -2.58

Orthologous

Rice:

Maize:

Wheat:

GO biological process

root development, root hair cell development, microtubule-based process

GO cellular component

nucleus, cytoplasm, dynein complex

GO molecular function

Rho guanyl-nucleotide exchange factor activity, protein binding

Protein domain

Pfam	PF01221, Dynein light chain type 1
Pfam	PF03759, PRONE (Plant-specific Rop nucleotide exchanger)
SMART	SM01375, Dynein_light

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

No regulation information

Protein-protein interaction network

The number of partners (degree) is: 26 (Top10%)

Coexpression network

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-3.02	7.95E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-4.22	3.81E-04
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-3.21	4.79E-03
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-4.14	3.48E-04
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	-2.35	4.47E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.51	4.00E-05
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.53	1.86E-10
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.52	2.48E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.75	8.70E-13