GO Enrichment Analysis of Co-expressed Genes with
AT1G52240
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
3 | GO:0042493: response to drug | 0.00E+00 |
4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
5 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
6 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
7 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
8 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
9 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
10 | GO:0015979: photosynthesis | 5.15E-09 |
11 | GO:0018298: protein-chromophore linkage | 7.94E-08 |
12 | GO:0000256: allantoin catabolic process | 2.65E-06 |
13 | GO:0010136: ureide catabolic process | 9.64E-06 |
14 | GO:0005977: glycogen metabolic process | 9.64E-06 |
15 | GO:0090391: granum assembly | 9.64E-06 |
16 | GO:0006145: purine nucleobase catabolic process | 2.19E-05 |
17 | GO:0006021: inositol biosynthetic process | 3.99E-05 |
18 | GO:0010021: amylopectin biosynthetic process | 3.99E-05 |
19 | GO:0009765: photosynthesis, light harvesting | 3.99E-05 |
20 | GO:0015995: chlorophyll biosynthetic process | 4.21E-05 |
21 | GO:0016123: xanthophyll biosynthetic process | 6.36E-05 |
22 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.83E-05 |
23 | GO:0046855: inositol phosphate dephosphorylation | 9.33E-05 |
24 | GO:0009645: response to low light intensity stimulus | 1.69E-04 |
25 | GO:0048564: photosystem I assembly | 2.16E-04 |
26 | GO:0031426: polycistronic mRNA processing | 2.39E-04 |
27 | GO:0071277: cellular response to calcium ion | 2.39E-04 |
28 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.39E-04 |
29 | GO:1904964: positive regulation of phytol biosynthetic process | 2.39E-04 |
30 | GO:0042371: vitamin K biosynthetic process | 2.39E-04 |
31 | GO:0010028: xanthophyll cycle | 2.39E-04 |
32 | GO:0006419: alanyl-tRNA aminoacylation | 2.39E-04 |
33 | GO:0010362: negative regulation of anion channel activity by blue light | 2.39E-04 |
34 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.39E-04 |
35 | GO:0009657: plastid organization | 2.67E-04 |
36 | GO:0000373: Group II intron splicing | 3.23E-04 |
37 | GO:0009658: chloroplast organization | 3.28E-04 |
38 | GO:0009638: phototropism | 3.83E-04 |
39 | GO:0080167: response to karrikin | 4.87E-04 |
40 | GO:0009793: embryo development ending in seed dormancy | 5.22E-04 |
41 | GO:0006435: threonyl-tRNA aminoacylation | 5.29E-04 |
42 | GO:0030187: melatonin biosynthetic process | 5.29E-04 |
43 | GO:0042853: L-alanine catabolic process | 5.29E-04 |
44 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.29E-04 |
45 | GO:0009629: response to gravity | 5.29E-04 |
46 | GO:0080005: photosystem stoichiometry adjustment | 5.29E-04 |
47 | GO:0006790: sulfur compound metabolic process | 5.92E-04 |
48 | GO:0055114: oxidation-reduction process | 6.59E-04 |
49 | GO:0006006: glucose metabolic process | 6.71E-04 |
50 | GO:0019253: reductive pentose-phosphate cycle | 7.56E-04 |
51 | GO:0009637: response to blue light | 7.79E-04 |
52 | GO:0046854: phosphatidylinositol phosphorylation | 8.45E-04 |
53 | GO:0009405: pathogenesis | 8.60E-04 |
54 | GO:0006013: mannose metabolic process | 8.60E-04 |
55 | GO:0010114: response to red light | 1.07E-03 |
56 | GO:0009644: response to high light intensity | 1.17E-03 |
57 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.23E-03 |
58 | GO:0046739: transport of virus in multicellular host | 1.23E-03 |
59 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.23E-03 |
60 | GO:0009067: aspartate family amino acid biosynthetic process | 1.23E-03 |
61 | GO:0006020: inositol metabolic process | 1.23E-03 |
62 | GO:0010239: chloroplast mRNA processing | 1.23E-03 |
63 | GO:0090307: mitotic spindle assembly | 1.23E-03 |
64 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.23E-03 |
65 | GO:0009650: UV protection | 1.23E-03 |
66 | GO:0009902: chloroplast relocation | 1.64E-03 |
67 | GO:0031122: cytoplasmic microtubule organization | 1.64E-03 |
68 | GO:0006096: glycolytic process | 1.91E-03 |
69 | GO:0016558: protein import into peroxisome matrix | 2.09E-03 |
70 | GO:0016120: carotene biosynthetic process | 2.09E-03 |
71 | GO:0009735: response to cytokinin | 2.26E-03 |
72 | GO:0019252: starch biosynthetic process | 2.34E-03 |
73 | GO:0009791: post-embryonic development | 2.34E-03 |
74 | GO:0000741: karyogamy | 2.57E-03 |
75 | GO:0009643: photosynthetic acclimation | 2.57E-03 |
76 | GO:0009416: response to light stimulus | 2.65E-03 |
77 | GO:0010189: vitamin E biosynthetic process | 3.09E-03 |
78 | GO:0009088: threonine biosynthetic process | 3.09E-03 |
79 | GO:0071470: cellular response to osmotic stress | 3.09E-03 |
80 | GO:0006400: tRNA modification | 3.64E-03 |
81 | GO:0009772: photosynthetic electron transport in photosystem II | 3.64E-03 |
82 | GO:1900056: negative regulation of leaf senescence | 3.64E-03 |
83 | GO:0010196: nonphotochemical quenching | 3.64E-03 |
84 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.64E-03 |
85 | GO:0009704: de-etiolation | 4.23E-03 |
86 | GO:0031540: regulation of anthocyanin biosynthetic process | 4.23E-03 |
87 | GO:0016559: peroxisome fission | 4.23E-03 |
88 | GO:0009642: response to light intensity | 4.23E-03 |
89 | GO:0017004: cytochrome complex assembly | 4.84E-03 |
90 | GO:0007623: circadian rhythm | 4.85E-03 |
91 | GO:0009409: response to cold | 4.87E-03 |
92 | GO:0009451: RNA modification | 4.99E-03 |
93 | GO:0010218: response to far red light | 5.18E-03 |
94 | GO:0090333: regulation of stomatal closure | 5.48E-03 |
95 | GO:0006754: ATP biosynthetic process | 5.48E-03 |
96 | GO:0098656: anion transmembrane transport | 5.48E-03 |
97 | GO:0006098: pentose-phosphate shunt | 5.48E-03 |
98 | GO:0009821: alkaloid biosynthetic process | 5.48E-03 |
99 | GO:0048507: meristem development | 5.48E-03 |
100 | GO:0009853: photorespiration | 5.96E-03 |
101 | GO:0010380: regulation of chlorophyll biosynthetic process | 6.15E-03 |
102 | GO:0009641: shade avoidance | 6.85E-03 |
103 | GO:0006949: syncytium formation | 6.85E-03 |
104 | GO:0006259: DNA metabolic process | 6.85E-03 |
105 | GO:0006415: translational termination | 7.58E-03 |
106 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.58E-03 |
107 | GO:0009773: photosynthetic electron transport in photosystem I | 7.58E-03 |
108 | GO:0006265: DNA topological change | 7.58E-03 |
109 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.58E-03 |
110 | GO:0009744: response to sucrose | 7.68E-03 |
111 | GO:0009725: response to hormone | 9.11E-03 |
112 | GO:0006094: gluconeogenesis | 9.11E-03 |
113 | GO:0009767: photosynthetic electron transport chain | 9.11E-03 |
114 | GO:0010223: secondary shoot formation | 9.92E-03 |
115 | GO:0010020: chloroplast fission | 9.92E-03 |
116 | GO:0009585: red, far-red light phototransduction | 1.04E-02 |
117 | GO:0010224: response to UV-B | 1.07E-02 |
118 | GO:0019853: L-ascorbic acid biosynthetic process | 1.07E-02 |
119 | GO:0006863: purine nucleobase transport | 1.16E-02 |
120 | GO:0006833: water transport | 1.16E-02 |
121 | GO:0009863: salicylic acid mediated signaling pathway | 1.25E-02 |
122 | GO:0045893: positive regulation of transcription, DNA-templated | 1.26E-02 |
123 | GO:0009269: response to desiccation | 1.43E-02 |
124 | GO:0055085: transmembrane transport | 1.47E-02 |
125 | GO:0006396: RNA processing | 1.52E-02 |
126 | GO:0080092: regulation of pollen tube growth | 1.53E-02 |
127 | GO:0019748: secondary metabolic process | 1.53E-02 |
128 | GO:0009411: response to UV | 1.62E-02 |
129 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.62E-02 |
130 | GO:0016117: carotenoid biosynthetic process | 1.82E-02 |
131 | GO:0034220: ion transmembrane transport | 1.93E-02 |
132 | GO:0010118: stomatal movement | 1.93E-02 |
133 | GO:0006606: protein import into nucleus | 1.93E-02 |
134 | GO:0046686: response to cadmium ion | 1.95E-02 |
135 | GO:0009058: biosynthetic process | 1.96E-02 |
136 | GO:0010197: polar nucleus fusion | 2.03E-02 |
137 | GO:0048868: pollen tube development | 2.03E-02 |
138 | GO:0015986: ATP synthesis coupled proton transport | 2.14E-02 |
139 | GO:0007059: chromosome segregation | 2.14E-02 |
140 | GO:0008654: phospholipid biosynthetic process | 2.25E-02 |
141 | GO:0010193: response to ozone | 2.36E-02 |
142 | GO:0006635: fatty acid beta-oxidation | 2.36E-02 |
143 | GO:0016032: viral process | 2.47E-02 |
144 | GO:0009828: plant-type cell wall loosening | 2.71E-02 |
145 | GO:0010468: regulation of gene expression | 3.06E-02 |
146 | GO:0001666: response to hypoxia | 3.07E-02 |
147 | GO:0010027: thylakoid membrane organization | 3.07E-02 |
148 | GO:0010411: xyloglucan metabolic process | 3.45E-02 |
149 | GO:0009817: defense response to fungus, incompatible interaction | 3.71E-02 |
150 | GO:0000160: phosphorelay signal transduction system | 3.84E-02 |
151 | GO:0009813: flavonoid biosynthetic process | 3.84E-02 |
152 | GO:0006811: ion transport | 3.97E-02 |
153 | GO:0007568: aging | 4.11E-02 |
154 | GO:0009910: negative regulation of flower development | 4.11E-02 |
155 | GO:0034599: cellular response to oxidative stress | 4.53E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0010276: phytol kinase activity | 0.00E+00 |
2 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
5 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
6 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
7 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
8 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
9 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
10 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
11 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
12 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
13 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
14 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
15 | GO:0016168: chlorophyll binding | 1.41E-06 |
16 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.65E-06 |
17 | GO:0019156: isoamylase activity | 2.65E-06 |
18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.65E-06 |
19 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.65E-06 |
20 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.65E-06 |
21 | GO:0008453: alanine-glyoxylate transaminase activity | 3.99E-05 |
22 | GO:0031409: pigment binding | 5.69E-05 |
23 | GO:0004556: alpha-amylase activity | 9.33E-05 |
24 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.29E-04 |
25 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.39E-04 |
26 | GO:0035671: enone reductase activity | 2.39E-04 |
27 | GO:0004451: isocitrate lyase activity | 2.39E-04 |
28 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 2.39E-04 |
29 | GO:0004813: alanine-tRNA ligase activity | 2.39E-04 |
30 | GO:0004829: threonine-tRNA ligase activity | 5.29E-04 |
31 | GO:0004751: ribose-5-phosphate isomerase activity | 8.60E-04 |
32 | GO:0070402: NADPH binding | 8.60E-04 |
33 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 8.60E-04 |
34 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 8.60E-04 |
35 | GO:0004848: ureidoglycolate hydrolase activity | 8.60E-04 |
36 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.60E-04 |
37 | GO:0016851: magnesium chelatase activity | 1.23E-03 |
38 | GO:0016149: translation release factor activity, codon specific | 1.23E-03 |
39 | GO:0009882: blue light photoreceptor activity | 1.23E-03 |
40 | GO:0004072: aspartate kinase activity | 1.23E-03 |
41 | GO:0048027: mRNA 5'-UTR binding | 1.23E-03 |
42 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.23E-03 |
43 | GO:0022891: substrate-specific transmembrane transporter activity | 1.48E-03 |
44 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.64E-03 |
45 | GO:0043015: gamma-tubulin binding | 1.64E-03 |
46 | GO:0043495: protein anchor | 1.64E-03 |
47 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 2.09E-03 |
48 | GO:0051011: microtubule minus-end binding | 2.09E-03 |
49 | GO:0004462: lactoylglutathione lyase activity | 2.57E-03 |
50 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.57E-03 |
51 | GO:0004332: fructose-bisphosphate aldolase activity | 2.57E-03 |
52 | GO:0000293: ferric-chelate reductase activity | 2.57E-03 |
53 | GO:0004559: alpha-mannosidase activity | 3.09E-03 |
54 | GO:0008195: phosphatidate phosphatase activity | 3.09E-03 |
55 | GO:0015631: tubulin binding | 3.09E-03 |
56 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.33E-03 |
57 | GO:0016597: amino acid binding | 3.41E-03 |
58 | GO:0019899: enzyme binding | 3.64E-03 |
59 | GO:0004033: aldo-keto reductase (NADP) activity | 4.23E-03 |
60 | GO:0016491: oxidoreductase activity | 4.61E-03 |
61 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 4.84E-03 |
62 | GO:0008135: translation factor activity, RNA binding | 4.84E-03 |
63 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 5.48E-03 |
64 | GO:0003747: translation release factor activity | 5.48E-03 |
65 | GO:0003746: translation elongation factor activity | 5.96E-03 |
66 | GO:0016844: strictosidine synthase activity | 6.15E-03 |
67 | GO:0042802: identical protein binding | 6.58E-03 |
68 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.58E-03 |
69 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.31E-03 |
70 | GO:0000049: tRNA binding | 8.33E-03 |
71 | GO:0008081: phosphoric diester hydrolase activity | 9.11E-03 |
72 | GO:0005315: inorganic phosphate transmembrane transporter activity | 9.11E-03 |
73 | GO:0000155: phosphorelay sensor kinase activity | 9.11E-03 |
74 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 9.92E-03 |
75 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.34E-02 |
76 | GO:0003727: single-stranded RNA binding | 1.72E-02 |
77 | GO:0008514: organic anion transmembrane transporter activity | 1.72E-02 |
78 | GO:0003924: GTPase activity | 1.82E-02 |
79 | GO:0009055: electron carrier activity | 1.99E-02 |
80 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.03E-02 |
81 | GO:0004519: endonuclease activity | 2.03E-02 |
82 | GO:0008080: N-acetyltransferase activity | 2.03E-02 |
83 | GO:0046872: metal ion binding | 2.13E-02 |
84 | GO:0010181: FMN binding | 2.14E-02 |
85 | GO:0004872: receptor activity | 2.25E-02 |
86 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.36E-02 |
87 | GO:0048038: quinone binding | 2.36E-02 |
88 | GO:0008237: metallopeptidase activity | 2.83E-02 |
89 | GO:0005200: structural constituent of cytoskeleton | 2.83E-02 |
90 | GO:0008483: transaminase activity | 2.83E-02 |
91 | GO:0015250: water channel activity | 3.07E-02 |
92 | GO:0016887: ATPase activity | 3.16E-02 |
93 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.45E-02 |
94 | GO:0016788: hydrolase activity, acting on ester bonds | 4.03E-02 |
95 | GO:0050897: cobalt ion binding | 4.11E-02 |
96 | GO:0003993: acid phosphatase activity | 4.53E-02 |
97 | GO:0050661: NADP binding | 4.81E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
2 | GO:0009507: chloroplast | 5.02E-33 |
3 | GO:0009535: chloroplast thylakoid membrane | 8.56E-23 |
4 | GO:0009570: chloroplast stroma | 3.22E-11 |
5 | GO:0009534: chloroplast thylakoid | 3.83E-10 |
6 | GO:0009941: chloroplast envelope | 8.02E-10 |
7 | GO:0009579: thylakoid | 4.75E-09 |
8 | GO:0010287: plastoglobule | 4.83E-06 |
9 | GO:0009543: chloroplast thylakoid lumen | 5.66E-06 |
10 | GO:0009523: photosystem II | 1.23E-05 |
11 | GO:0009538: photosystem I reaction center | 2.16E-04 |
12 | GO:0009515: granal stacked thylakoid | 2.39E-04 |
13 | GO:0009782: photosystem I antenna complex | 2.39E-04 |
14 | GO:0010319: stromule | 3.53E-04 |
15 | GO:0031969: chloroplast membrane | 4.87E-04 |
16 | GO:0008274: gamma-tubulin ring complex | 5.29E-04 |
17 | GO:0030095: chloroplast photosystem II | 7.56E-04 |
18 | GO:0030076: light-harvesting complex | 8.45E-04 |
19 | GO:0010007: magnesium chelatase complex | 8.60E-04 |
20 | GO:0031977: thylakoid lumen | 9.64E-04 |
21 | GO:0009654: photosystem II oxygen evolving complex | 1.14E-03 |
22 | GO:0042651: thylakoid membrane | 1.14E-03 |
23 | GO:0000923: equatorial microtubule organizing center | 1.23E-03 |
24 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 1.64E-03 |
25 | GO:0009517: PSII associated light-harvesting complex II | 1.64E-03 |
26 | GO:0009522: photosystem I | 2.18E-03 |
27 | GO:0019898: extrinsic component of membrane | 2.34E-03 |
28 | GO:0009706: chloroplast inner membrane | 2.42E-03 |
29 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.57E-03 |
30 | GO:0016020: membrane | 3.09E-03 |
31 | GO:0009295: nucleoid | 3.21E-03 |
32 | GO:0048046: apoplast | 4.69E-03 |
33 | GO:0000922: spindle pole | 5.48E-03 |
34 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.48E-03 |
35 | GO:0042644: chloroplast nucleoid | 5.48E-03 |
36 | GO:0016324: apical plasma membrane | 6.85E-03 |
37 | GO:0009508: plastid chromosome | 9.11E-03 |
38 | GO:0005777: peroxisome | 1.26E-02 |
39 | GO:0009505: plant-type cell wall | 1.34E-02 |
40 | GO:0005759: mitochondrial matrix | 2.33E-02 |
41 | GO:0005778: peroxisomal membrane | 2.83E-02 |
42 | GO:0009707: chloroplast outer membrane | 3.71E-02 |