gene detail

Gene description

TAIR ID: AT1G51880

Short description: root hair specific 6

Pathogen responsiveness: -0.51

General responsiveness: -3.64

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, phosphorylation

GO cellular component

integral component of membrane, extracellular region

GO molecular function

protein kinase activity, ATP binding, protein serine/threonine kinase activity, kinase activity

Protein domain

Pfam	PF12819, Carbohydrate-binding protein of the ER
Pfam	PF07714, Protein tyrosine kinase
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 22 (Top10%)

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	3.38	1.51E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.73	1.11E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	3.15	3.21E-05
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	2.10	1.36E-05
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.89	6.91E-05
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	1.89	1.70E-04
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	2.06	4.06E-05
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	2.75	7.21E-08
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	2.20	1.07E-05
GSE56094	Col, WT, control 4 h	Col, WT, hrpA- 4 h	1.89	7.52E-04
GSE56094	Col, WT, control 5 h	Col, WT, hrpA- 5 h	2.46	1.56E-06
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	2.34	4.01E-06
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	2.28	4.96E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	2.52	2.41E-07
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	2.35	1.76E-06