co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G51880

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043201: response to leucine	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0080053: response to phenylalanine	0.00E+00
4	GO:0045730: respiratory burst	0.00E+00
5	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
6	GO:0006903: vesicle targeting	0.00E+00
7	GO:0009073: aromatic amino acid family biosynthetic process	1.46E-06
8	GO:0080147: root hair cell development	5.38E-06
9	GO:0009423: chorismate biosynthetic process	2.12E-05
10	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.81E-05
11	GO:0009808: lignin metabolic process	4.85E-05
12	GO:0080173: male-female gamete recognition during double fertilization	7.75E-05
13	GO:2000028: regulation of photoperiodism, flowering	1.40E-04
14	GO:0019521: D-gluconate metabolic process	1.85E-04
15	GO:0019632: shikimate metabolic process	1.85E-04
16	GO:0052542: defense response by callose deposition	1.85E-04
17	GO:0042939: tripeptide transport	1.85E-04
18	GO:0030187: melatonin biosynthetic process	1.85E-04
19	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.85E-04
20	GO:0051262: protein tetramerization	1.85E-04
21	GO:1902066: regulation of cell wall pectin metabolic process	1.85E-04
22	GO:0080167: response to karrikin	2.13E-04
23	GO:0009809: lignin biosynthetic process	2.14E-04
24	GO:1901672: positive regulation of systemic acquired resistance	3.11E-04
25	GO:0048586: regulation of long-day photoperiodism, flowering	3.11E-04
26	GO:0032922: circadian regulation of gene expression	3.11E-04
27	GO:0071398: cellular response to fatty acid	3.11E-04
28	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	3.11E-04
29	GO:0010104: regulation of ethylene-activated signaling pathway	4.49E-04
30	GO:0002679: respiratory burst involved in defense response	4.49E-04
31	GO:0006612: protein targeting to membrane	4.49E-04
32	GO:0006893: Golgi to plasma membrane transport	4.49E-04
33	GO:0010116: positive regulation of abscisic acid biosynthetic process	4.49E-04
34	GO:0007231: osmosensory signaling pathway	4.49E-04
35	GO:0033356: UDP-L-arabinose metabolic process	5.98E-04
36	GO:0033500: carbohydrate homeostasis	5.98E-04
37	GO:0042938: dipeptide transport	5.98E-04
38	GO:0006904: vesicle docking involved in exocytosis	7.15E-04
39	GO:0050665: hydrogen peroxide biosynthetic process	9.24E-04
40	GO:0009611: response to wounding	9.86E-04
41	GO:0009832: plant-type cell wall biogenesis	1.08E-03
42	GO:0071470: cellular response to osmotic stress	1.10E-03
43	GO:0009094: L-phenylalanine biosynthetic process	1.10E-03
44	GO:0015977: carbon fixation	1.10E-03
45	GO:0043090: amino acid import	1.29E-03
46	GO:0006744: ubiquinone biosynthetic process	1.29E-03
47	GO:1900056: negative regulation of leaf senescence	1.29E-03
48	GO:0080186: developmental vegetative growth	1.29E-03
49	GO:0071669: plant-type cell wall organization or biogenesis	1.29E-03
50	GO:1902074: response to salt	1.29E-03
51	GO:0098869: cellular oxidant detoxification	1.29E-03
52	GO:0006099: tricarboxylic acid cycle	1.35E-03
53	GO:0010928: regulation of auxin mediated signaling pathway	1.48E-03
54	GO:0006887: exocytosis	1.52E-03
55	GO:0060321: acceptance of pollen	1.69E-03
56	GO:0009699: phenylpropanoid biosynthetic process	1.69E-03
57	GO:0009932: cell tip growth	1.69E-03
58	GO:0006098: pentose-phosphate shunt	1.91E-03
59	GO:0006754: ATP biosynthetic process	1.91E-03
60	GO:0009835: fruit ripening	1.91E-03
61	GO:0007338: single fertilization	1.91E-03
62	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.14E-03
63	GO:0008202: steroid metabolic process	2.14E-03
64	GO:0006857: oligopeptide transport	2.36E-03
65	GO:0051555: flavonol biosynthetic process	2.37E-03
66	GO:0043069: negative regulation of programmed cell death	2.37E-03
67	GO:0009698: phenylpropanoid metabolic process	2.61E-03
68	GO:0072593: reactive oxygen species metabolic process	2.61E-03
69	GO:0042742: defense response to bacterium	2.76E-03
70	GO:0008152: metabolic process	2.84E-03
71	GO:0015706: nitrate transport	2.86E-03
72	GO:0030036: actin cytoskeleton organization	3.12E-03
73	GO:0018107: peptidyl-threonine phosphorylation	3.12E-03
74	GO:0055046: microgametogenesis	3.12E-03
75	GO:0010167: response to nitrate	3.66E-03
76	GO:0010053: root epidermal cell differentiation	3.66E-03
77	GO:0006874: cellular calcium ion homeostasis	4.52E-03
78	GO:0048511: rhythmic process	4.82E-03
79	GO:0016036: cellular response to phosphate starvation	5.01E-03
80	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.13E-03
81	GO:0009693: ethylene biosynthetic process	5.45E-03
82	GO:0040007: growth	5.45E-03
83	GO:0009561: megagametogenesis	5.77E-03
84	GO:0007166: cell surface receptor signaling pathway	6.13E-03
85	GO:0034220: ion transmembrane transport	6.44E-03
86	GO:0015991: ATP hydrolysis coupled proton transport	6.44E-03
87	GO:0055114: oxidation-reduction process	6.47E-03
88	GO:0006468: protein phosphorylation	6.67E-03
89	GO:0032502: developmental process	8.22E-03
90	GO:0006970: response to osmotic stress	8.94E-03
91	GO:0009567: double fertilization forming a zygote and endosperm	8.97E-03
92	GO:0051607: defense response to virus	9.75E-03
93	GO:0009615: response to virus	1.02E-02
94	GO:0016192: vesicle-mediated transport	1.08E-02
95	GO:0042128: nitrate assimilation	1.10E-02
96	GO:0006888: ER to Golgi vesicle-mediated transport	1.14E-02
97	GO:0030244: cellulose biosynthetic process	1.22E-02
98	GO:0009407: toxin catabolic process	1.31E-02
99	GO:0009631: cold acclimation	1.36E-02
100	GO:0010119: regulation of stomatal movement	1.36E-02
101	GO:0006865: amino acid transport	1.40E-02
102	GO:0032259: methylation	1.46E-02
103	GO:0009408: response to heat	1.52E-02
104	GO:0009753: response to jasmonic acid	1.64E-02
105	GO:0051707: response to other organism	1.73E-02
106	GO:0009636: response to toxic substance	1.88E-02
107	GO:0009873: ethylene-activated signaling pathway	1.97E-02
108	GO:0009664: plant-type cell wall organization	2.04E-02
109	GO:0009846: pollen germination	2.04E-02
110	GO:0042538: hyperosmotic salinity response	2.04E-02
111	GO:0006096: glycolytic process	2.41E-02
112	GO:0009620: response to fungus	2.58E-02
113	GO:0009555: pollen development	2.71E-02
114	GO:0009416: response to light stimulus	2.71E-02
115	GO:0018105: peptidyl-serine phosphorylation	2.81E-02
116	GO:0006396: RNA processing	2.81E-02
117	GO:0006457: protein folding	3.50E-02
118	GO:0042744: hydrogen peroxide catabolic process	3.54E-02
119	GO:0006952: defense response	3.62E-02
120	GO:0007623: circadian rhythm	4.06E-02
121	GO:0010150: leaf senescence	4.06E-02
122	GO:0009617: response to bacterium	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
2	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
3	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
4	GO:0004107: chorismate synthase activity	0.00E+00
5	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
6	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
7	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
8	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
9	GO:0004656: procollagen-proline 4-dioxygenase activity	2.12E-05
10	GO:0017096: acetylserotonin O-methyltransferase activity	7.75E-05
11	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	7.75E-05
12	GO:0032934: sterol binding	1.85E-04
13	GO:0052691: UDP-arabinopyranose mutase activity	1.85E-04
14	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	1.85E-04
15	GO:0042937: tripeptide transporter activity	1.85E-04
16	GO:0031418: L-ascorbic acid binding	2.27E-04
17	GO:0016174: NAD(P)H oxidase activity	3.11E-04
18	GO:0008964: phosphoenolpyruvate carboxylase activity	3.11E-04
19	GO:0016301: kinase activity	4.71E-04
20	GO:0016866: intramolecular transferase activity	5.98E-04
21	GO:0047769: arogenate dehydratase activity	5.98E-04
22	GO:0042936: dipeptide transporter activity	5.98E-04
23	GO:0004664: prephenate dehydratase activity	5.98E-04
24	GO:0008194: UDP-glycosyltransferase activity	7.90E-04
25	GO:0004012: phospholipid-translocating ATPase activity	1.10E-03
26	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.10E-03
27	GO:0000287: magnesium ion binding	1.15E-03
28	GO:0016621: cinnamoyl-CoA reductase activity	1.29E-03
29	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.29E-03
30	GO:0004525: ribonuclease III activity	1.48E-03
31	GO:0004564: beta-fructofuranosidase activity	1.48E-03
32	GO:0008142: oxysterol binding	1.69E-03
33	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.91E-03
34	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.91E-03
35	GO:0004743: pyruvate kinase activity	2.14E-03
36	GO:0004575: sucrose alpha-glucosidase activity	2.14E-03
37	GO:0030955: potassium ion binding	2.14E-03
38	GO:0015112: nitrate transmembrane transporter activity	2.14E-03
39	GO:0008171: O-methyltransferase activity	2.37E-03
40	GO:0015198: oligopeptide transporter activity	2.86E-03
41	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.12E-03
42	GO:0004022: alcohol dehydrogenase (NAD) activity	3.12E-03
43	GO:0031072: heat shock protein binding	3.12E-03
44	GO:0005524: ATP binding	3.39E-03
45	GO:0005217: intracellular ligand-gated ion channel activity	3.66E-03
46	GO:0004970: ionotropic glutamate receptor activity	3.66E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.01E-03
48	GO:0016760: cellulose synthase (UDP-forming) activity	5.45E-03
49	GO:0030276: clathrin binding	6.78E-03
50	GO:0010181: FMN binding	7.13E-03
51	GO:0050662: coenzyme binding	7.13E-03
52	GO:0004601: peroxidase activity	8.30E-03
53	GO:0004674: protein serine/threonine kinase activity	9.39E-03
54	GO:0016597: amino acid binding	9.75E-03
55	GO:0015250: water channel activity	1.02E-02
56	GO:0004871: signal transducer activity	1.29E-02
57	GO:0004222: metalloendopeptidase activity	1.31E-02
58	GO:0003824: catalytic activity	1.43E-02
59	GO:0050661: NADP binding	1.59E-02
60	GO:0004364: glutathione transferase activity	1.68E-02
61	GO:0015293: symporter activity	1.88E-02
62	GO:0015171: amino acid transmembrane transporter activity	2.30E-02
63	GO:0016887: ATPase activity	2.37E-02
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.58E-02
65	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.58E-02
66	GO:0022857: transmembrane transporter activity	2.64E-02
67	GO:0051082: unfolded protein binding	2.75E-02
68	GO:0016746: transferase activity, transferring acyl groups	2.81E-02
69	GO:0016758: transferase activity, transferring hexosyl groups	3.17E-02
70	GO:0030246: carbohydrate binding	3.64E-02
71	GO:0005515: protein binding	3.64E-02
72	GO:0008565: protein transporter activity	3.67E-02
73	GO:0042802: identical protein binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	1.32E-08
3	GO:0045252: oxoglutarate dehydrogenase complex	7.75E-05
4	GO:0000138: Golgi trans cisterna	7.75E-05
5	GO:0005829: cytosol	4.28E-04
6	GO:0070062: extracellular exosome	4.49E-04
7	GO:0005794: Golgi apparatus	5.68E-04
8	GO:0000145: exocyst	5.98E-04
9	GO:0031982: vesicle	1.48E-03
10	GO:0030131: clathrin adaptor complex	1.48E-03
11	GO:0016020: membrane	1.94E-03
12	GO:0030665: clathrin-coated vesicle membrane	2.14E-03
13	GO:0009506: plasmodesma	2.28E-03
14	GO:0031012: extracellular matrix	3.12E-03
15	GO:0005795: Golgi stack	3.66E-03
16	GO:0016021: integral component of membrane	4.06E-03
17	GO:0005618: cell wall	6.44E-03
18	GO:0005770: late endosome	6.78E-03
19	GO:0005802: trans-Golgi network	9.45E-03
20	GO:0005768: endosome	1.11E-02
21	GO:0031902: late endosome membrane	1.64E-02
22	GO:0005774: vacuolar membrane	1.81E-02
23	GO:0000139: Golgi membrane	1.87E-02
24	GO:0005856: cytoskeleton	1.88E-02
25	GO:0005887: integral component of plasma membrane	2.07E-02
26	GO:0005789: endoplasmic reticulum membrane	2.17E-02
27	GO:0005834: heterotrimeric G-protein complex	2.52E-02
28	GO:0009543: chloroplast thylakoid lumen	3.23E-02
29	GO:0009524: phragmoplast	3.35E-02
30	GO:0031225: anchored component of membrane	4.21E-02
31	GO:0009570: chloroplast stroma	4.60E-02
32	GO:0046658: anchored component of plasma membrane	4.95E-02