Gene: AT1G49950
     


Gene description


TAIR ID: AT1G49950

Short description: telomere repeat binding factor 1

Pathogen responsiveness: -3.26

General responsiveness: -2.85

Orthologous


Rice:

OS01G0589300   OS01G0708000  

Maize:

GRMZM2G095239  

Wheat: No orthologous gene

GO biological process


telomeric loop formation, response to jasmonic acid, regulation of transcription from RNA polymerase II promoter, response to abscisic acid, response to ethylene, response to salt stress, response to gibberellin, response to auxin, response to cadmium ion, transcription, DNA-templated, nucleosome assembly, response to salicylic acid


GO cellular component


chromatin, nucleus, nucleolus, nuclear chromosome, telomeric region, nucleosome


GO molecular function


protein binding, protein homodimerization activity, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
PfamPF00538, linker histone H1 and H5 family
SMARTSM00526, H15
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.