Gene: AT1G49230
     

Gene description


TAIR ID: AT1G49230

Short description: RING/U-box superfamily protein

Pathogen responsiveness: 0.31

General responsiveness: 0.11

Orthologous


Rice:

OS04G0419550  

Maize:

GRMZM2G059110  

Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G36920, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 40 (Top5%)

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d2.322.89E-04
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.556.00E-05
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.861.34E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h3.506.39E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h4.002.99E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.371.02E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h4.071.42E-14
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-1.772.74E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.865.58E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-3.062.73E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.667.89E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.583.60E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.082.97E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.204.80E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.515.73E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.084.15E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.331.46E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.361.57E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.771.95E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.571.30E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.741.92E-08
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.681.30E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.923.06E-03






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