Gene: AT1G49220
     

Gene description


TAIR ID: AT1G49220

Short description: RING/U-box superfamily protein

Pathogen responsiveness: NA

General responsiveness: -3.94

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h3.281.11E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h3.891.12E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.323.39E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.696.90E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-3.037.45E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.767.18E-03
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.973.76E-08
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.791.55E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.584.87E-07
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.609.24E-07






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